Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 3.2e-68 261.5 125 100.0
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 2.6e-62 241.9 125 88.0
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 7.7e-62 240.4 125 89.6
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 1.3e-61 239.6 125 86.4
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 2.2e-61 238.8 125 85.6
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.9e-61 238.4 125 88.0
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.9e-61 238.4 125 88.0
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 3.8e-61 238.0 125 85.6
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 5.0e-61 237.7 125 88.0
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 5.0e-61 237.7 125 88.0
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 5.0e-61 237.7 125 88.0
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 8.5e-61 236.9 125 87.2
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.1e-60 236.5 125 87.2
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.4e-60 236.1 125 84.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 2.5e-60 235.3 125 87.2
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 2.5e-60 235.3 125 86.4
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 2.5e-60 235.3 125 84.8
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 3.2e-60 235.0 125 87.2
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 3.2e-60 235.0 125 88.8
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 4.2e-60 234.6 125 86.4
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 4.2e-60 234.6 125 86.4
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.2e-60 234.6 125 86.4
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 5.5e-60 234.2 125 84.0
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 5.5e-60 234.2 125 83.2
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 7.2e-60 233.8 125 85.6
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.6e-59 232.6 125 86.4
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 6.1e-59 230.7 125 85.6
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.1e-59 230.7 125 86.4
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 8.0e-59 230.3 125 85.6
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.8e-58 229.2 125 83.2
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.3e-58 228.8 125 82.4
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 2.3e-58 228.8 124 86.3
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 2.3e-58 228.8 124 83.1
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 2.3e-58 228.8 124 83.1
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 5.2e-58 227.6 125 88.0
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 8.8e-58 226.9 125 83.2
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 8.8e-58 226.9 125 84.0
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 83.2
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 84.0
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 1.1e-57 226.5 125 84.0
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.5e-57 226.1 132 80.3
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.0e-57 225.7 125 84.8
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 4.4e-57 224.6 125 83.2
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 5.7e-57 224.2 125 84.8
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.4e-57 223.8 125 85.6
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.4e-57 223.8 125 85.6
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 9.7e-57 223.4 125 82.4
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 1.3e-56 223.0 125 83.2
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 2.2e-56 222.2 125 84.0
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.8e-56 221.9 137 78.8
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 2.8e-56 221.9 125 84.8
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.8e-56 221.9 125 84.8
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.8e-56 221.9 125 84.8
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 2.8e-56 221.9 125 84.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 6.3e-56 220.7 125 82.4
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.1e-55 219.9 125 82.4
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 1.4e-55 219.5 125 81.6
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.8e-55 219.2 125 83.2
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 3.1e-55 218.4 125 80.8
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.1e-55 218.0 125 83.2
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.2e-54 216.5 125 81.6
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.6e-54 216.1 125 81.6
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.0e-54 215.7 125 80.8
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 2.0e-54 215.7 125 80.8
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 3.5e-54 214.9 125 80.8
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 7.7e-54 213.8 125 81.6
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 1.0e-53 213.4 125 81.6
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 1.0e-53 213.4 125 80.0
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 80.0
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 80.0
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 79.2
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 2.9e-53 211.8 108 86.1
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 3.8e-53 211.5 125 80.0
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.1e-52 209.9 125 79.2
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 1.5e-52 209.5 125 78.4
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.5e-52 209.5 125 77.6
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.9e-52 209.1 125 80.8
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.9e-52 209.1 125 78.4
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 78.4
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 2.1e-51 205.7 150 68.0
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 80.8
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 76.0
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 3.0e-50 201.8 172 61.6
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 3.0e-50 201.8 204 54.4
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 6.7e-50 200.7 103 88.3
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 75.2
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 2.6e-49 198.7 125 74.4
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 73.6
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.7e-49 197.6 103 87.4
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 75.2
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 72.8
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 72.0
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 73.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.4e-47 193.0 103 85.4
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 4.1e-47 191.4 125 70.4
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 9.1e-47 190.3 103 83.5
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 7.7e-46 187.2 125 72.0
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 2.9e-45 185.3 122 68.0
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 3.2e-44 181.8 124 71.0
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 7.2e-44 180.6 125 68.0
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 4.7e-43 177.9 123 66.7
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 4.7e-43 177.9 123 66.7
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 6.1e-43 177.6 125 65.6
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 2.3e-42 175.6 125 66.4
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 3.0e-42 175.3 120 67.5
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 2.0e-41 172.6 125 66.4
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 2.0e-41 172.6 125 66.4
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 3.7e-40 168.3 126 66.7
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 7.0e-39 164.1 125 64.8
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 4.7e-35 151.4 119 63.0
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 1.4e-34 149.8 113 60.2
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 1.6e-30 136.3 81 77.8
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 1.6e-30 136.3 81 77.8
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 2.6e-25 119.0 108 58.3
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 1.7e-24 116.3 81 66.7
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 3.2e-23 112.1 82 67.1
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.6e-22 109.8 69 76.8
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.3e-21 106.7 58 79.3
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.3e-21 106.7 58 79.3
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 3.9e-21 105.1 79 65.8
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 3.9e-21 105.1 79 65.8
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 2.1e-19 99.4 77 62.3
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.8e-19 99.0 53 81.1
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.2e-17 93.6 58 69.0
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 1.1e-15 87.0 65 66.2
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 1.1e-12 77.0 48 79.2
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 1.1e-12 77.0 45 77.8
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.9e-12 76.3 44 79.5
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.4e-07 59.3 40 70.0


User provided reference genes

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