Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 2.7e-33 144.8 77 100.0
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 1.5e-20 102.4 57 93.0
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 1.0e-19 99.8 57 87.7
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 1.9e-18 95.5 57 82.5
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 4.2e-18 94.4 57 82.5
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 5.5e-18 94.0 57 84.2
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 5.5e-18 94.0 57 82.5
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 2.7e-17 91.7 57 80.7
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 3.6e-17 91.3 57 75.4
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 6.1e-17 90.5 57 78.9
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 7.9e-17 90.1 57 78.9
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 7.9e-17 90.1 57 78.9
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 7.9e-17 90.1 57 78.9
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 7.9e-17 90.1 57 77.2
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 1.0e-16 89.7 56 82.1
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 3.0e-16 88.2 56 80.4
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 3.9e-16 87.8 53 83.0
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 8.7e-16 86.7 54 79.6
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.1e-15 86.3 57 73.7
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 1.1e-15 86.3 55 76.4
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 1.9e-15 85.5 57 75.4
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 2.5e-15 85.1 55 76.4
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 3.3e-15 84.7 55 76.4
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 5.7e-15 84.0 57 75.4
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.3e-14 82.8 56 73.2
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 1.6e-14 82.4 61 73.8
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 2.2e-14 82.0 61 73.8
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 1.1e-13 79.7 54 72.2
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 3.1e-13 78.2 61 67.2
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 9.1e-13 76.6 61 68.9
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 2.6e-12 75.1 60 70.0
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 3.4e-12 74.7 61 63.9
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 3.4e-12 74.7 61 68.9
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 3.4e-12 74.7 61 65.6
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.0e-11 73.2 60 68.3
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 2.9e-11 71.6 55 65.5
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.9e-11 71.6 60 66.7
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 3.8e-11 71.2 61 59.0
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 6.5e-11 70.5 61 63.9
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 6.5e-11 70.5 61 65.6
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 6.5e-11 70.5 60 68.3
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 1.1e-10 69.7 59 67.8
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 1.1e-10 69.7 59 62.7
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.1e-10 69.7 59 64.4
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.4e-10 69.3 55 63.6
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.4e-10 69.3 55 63.6
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 1.4e-10 69.3 55 63.6
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 1.9e-10 68.9 59 61.0
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 1.9e-10 68.9 59 64.4
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 1.9e-10 68.9 55 63.6
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 1.9e-10 68.9 60 56.7
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 1.9e-10 68.9 60 65.0
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 1.9e-10 68.9 55 63.6
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.9e-10 68.9 61 62.3
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.9e-10 68.9 61 62.3
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 2.5e-10 68.6 55 63.6
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 2.5e-10 68.6 60 58.3
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 3.2e-10 68.2 55 63.6
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 3.2e-10 68.2 61 59.0
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 4.2e-10 67.8 57 63.2
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 4.2e-10 67.8 57 63.2
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 4.2e-10 67.8 59 62.7
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 5.5e-10 67.4 59 57.6
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 5.5e-10 67.4 59 57.6
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 5.5e-10 67.4 49 69.4
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 9.4e-10 66.6 58 63.8
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 9.4e-10 66.6 60 58.3
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.2e-09 66.2 54 64.8
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 1.2e-09 66.2 59 59.3
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 1.6e-09 65.9 59 61.0
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.1e-09 65.5 55 60.0
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 2.1e-09 65.5 59 57.6
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 2.7e-09 65.1 59 64.4
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 2.7e-09 65.1 61 60.7
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 3.6e-09 64.7 60 56.7
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 3.6e-09 64.7 57 57.9
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 4.6e-09 64.3 59 55.9
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 4.6e-09 64.3 59 55.9
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 4.6e-09 64.3 59 55.9
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 4.6e-09 64.3 55 54.5
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 4.6e-09 64.3 61 60.7
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 6.1e-09 63.9 59 55.9
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 6.1e-09 63.9 59 55.9
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 6.1e-09 63.9 59 55.9
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 6.1e-09 63.9 59 55.9
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 6.1e-09 63.9 59 55.9
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 6.1e-09 63.9 60 60.0
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 6.1e-09 63.9 58 62.1
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 6.1e-09 63.9 58 62.1
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 6.1e-09 63.9 58 62.1
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 6.1e-09 63.9 58 62.1
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 6.1e-09 63.9 60 55.0
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 6.1e-09 63.9 57 63.2
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 7.9e-09 63.5 59 57.6
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 7.9e-09 63.5 56 60.7
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 1.0e-08 63.2 60 60.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 1.4e-08 62.8 59 54.2
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 1.4e-08 62.8 61 57.4
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.8e-08 62.4 36 83.3
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 1.8e-08 62.4 57 59.6
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 1.8e-08 62.4 58 58.6
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 1.8e-08 62.4 56 57.1
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 2.3e-08 62.0 57 56.1
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 3.9e-08 61.2 58 56.9
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 5.1e-08 60.8 59 52.5
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 5.1e-08 60.8 49 59.2
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 8.8e-08 60.1 59 59.3
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 8.8e-08 60.1 58 60.3
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 8.8e-08 60.1 59 54.2
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 8.8e-08 60.1 60 53.3
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 1.5e-07 59.3 40 70.0
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 3.3e-07 58.2 58 56.9
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 5.7e-07 57.4 40 67.5
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 7.4e-07 57.0 38 68.4
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 7.4e-07 57.0 59 59.3
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 7.4e-07 57.0 59 59.3
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 9.7e-07 56.6 59 52.5
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 1.3e-06 56.2 55 52.7
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 1.3e-06 56.2 35 74.3
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.7e-06 55.8 60 51.7
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 2.8e-06 55.1 57 54.4
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 3.7e-06 54.7 37 70.3
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 6.3e-06 53.9 39 64.1
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 8.2e-06 53.5 58 55.2


User provided reference genes

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