Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 2.0e-100 369.0 175 100.0
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 1.4e-74 283.1 148 87.2
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 1.0e-72 276.9 148 85.1
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 2.3e-72 275.8 151 84.8
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 3.0e-72 275.4 148 84.5
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 8.8e-72 273.9 148 83.1
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 1.5e-71 273.1 148 83.8
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 1.5e-71 273.1 151 84.1
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 1.5e-71 273.1 148 83.8
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.5e-71 273.1 151 84.1
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 3.3e-71 271.9 151 82.8
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 3.3e-71 271.9 151 83.4
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.3e-71 271.9 151 82.8
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 4.4e-71 271.6 148 83.1
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 4.4e-71 271.6 156 81.4
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 5.7e-71 271.2 151 82.8
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.7e-71 271.2 148 82.4
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 7.4e-71 270.8 151 82.8
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 9.7e-71 270.4 148 81.8
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.3e-70 270.0 151 82.1
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 2.8e-70 268.9 147 82.3
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 3.7e-70 268.5 151 82.1
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 3.7e-70 268.5 145 85.5
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 8.2e-70 267.3 151 81.5
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.4e-69 266.5 151 82.1
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 1.8e-69 266.2 151 82.8
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 1.8e-69 266.2 151 82.1
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 5.3e-69 264.6 151 81.5
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 7.0e-69 264.2 151 80.8
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 9.1e-69 263.8 151 80.8
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.0e-68 262.7 155 78.7
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 2.6e-68 262.3 148 81.8
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 2.6e-68 262.3 151 78.8
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 4.5e-68 261.5 148 81.1
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 5.9e-68 261.2 151 78.8
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 5.9e-68 261.2 155 78.1
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 5.9e-68 261.2 155 78.1
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 5.9e-68 261.2 149 81.2
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 1.0e-67 260.4 152 80.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.0e-67 260.4 149 80.5
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.3e-67 260.0 151 78.8
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 2.2e-67 259.2 148 80.4
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 2.9e-67 258.8 148 79.7
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 2.9e-67 258.8 151 79.5
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 6.5e-67 257.7 152 79.6
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 8.5e-67 257.3 151 78.1
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 8.5e-67 257.3 151 78.8
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 1.9e-66 256.1 151 78.1
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 2.5e-66 255.8 151 76.8
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 3.2e-66 255.4 148 79.1
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.2e-66 255.4 151 77.5
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 3.2e-66 255.4 145 80.0
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 4.2e-66 255.0 151 78.1
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 5.5e-66 254.6 151 76.8
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 7.2e-66 254.2 148 77.0
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 7.2e-66 254.2 151 78.1
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 1.6e-65 253.1 148 76.4
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.6e-65 253.1 149 77.2
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 2.1e-65 252.7 156 71.8
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 2.7e-65 252.3 151 76.2
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 3.6e-65 251.9 148 76.4
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 3.6e-65 251.9 148 77.0
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 8.0e-65 250.8 148 78.4
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 3.9e-64 248.4 148 75.7
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 5.2e-64 248.1 148 75.7
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 5.2e-64 248.1 148 77.0
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 8.8e-64 247.3 148 77.0
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 1.1e-63 246.9 146 78.1
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.1e-63 246.9 148 75.0
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 1.1e-63 246.9 148 77.0
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.6e-63 245.7 147 78.2
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 2.6e-63 245.7 148 77.0
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 4.4e-63 245.0 165 70.3
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 7.4e-63 244.2 151 74.2
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 4.8e-62 241.5 148 73.0
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 8.2e-62 240.7 148 73.0
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 8.2e-62 240.7 148 73.0
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 1.8e-61 239.6 148 75.0
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 1.8e-61 239.6 203 61.1
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 3.1e-61 238.8 182 63.2
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 4.1e-61 238.4 148 73.0
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 1.2e-60 236.9 148 71.6
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 2.6e-60 235.7 188 63.3
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.7e-59 233.0 147 71.4
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 2.5e-58 229.2 169 66.3
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.2e-57 226.9 132 78.8
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.0e-56 223.8 125 83.2
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 3.0e-56 222.2 180 62.8
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.5e-55 219.9 131 77.9
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 5.7e-55 218.0 196 55.1
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 9.8e-55 217.2 154 69.5
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 2.2e-54 216.1 118 84.7
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 4.8e-54 214.9 148 65.5
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.8e-53 213.0 138 73.2
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 2.0e-52 209.5 115 88.7
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 3.5e-52 208.8 140 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 4.5e-52 208.4 150 64.7
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 6.5e-51 204.5 153 63.4
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 1.8e-48 196.4 115 80.0
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.0e-43 178.3 161 59.0
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.0e-43 178.3 161 59.0
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 1.9e-42 176.4 98 84.7
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 3.4e-39 165.6 99 76.8
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 9.8e-39 164.1 156 51.9
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.9e-38 162.5 109 71.6
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 2.7e-36 156.0 145 57.9
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 6.8e-32 141.4 81 79.0
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 1.4e-29 133.7 74 78.4
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 1.7e-27 126.7 87 62.1
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 3.7e-14 82.4 47 74.5
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 1.6e-09 67.0 40 70.0
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.6e-09 67.0 39 71.8
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 3.4e-07 59.3 29 89.7


User provided reference genes

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