Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g27130 Coffea canephora HOM05D004867 ORTHO05D005729 5.8e-209 730.7 385 100.0
PGSC0003DMG402006333 Solanum tuberosum HOM05D004867 ORTHO05D005729 2.3e-96 356.7 390 54.4
Sopen01g033570 Solanum pennellii HOM05D004867 ORTHO05D005729 5.0e-96 355.5 393 53.9
Nitab4.5_0000892g0050 Nicotiana tabacum HOM05D004867 ORTHO05D005729 6.6e-96 355.1 394 54.8
Solyc01g074010.4 Solanum lycopersicum HOM05D004867 ORTHO05D005729 1.1e-95 354.4 393 53.9
Nitab4.5_0003792g0030 Nicotiana tabacum HOM05D004867 ORTHO05D005729 1.2e-94 350.9 393 53.9
CAN.G1393.5 Capsicum annuum HOM05D004867 ORTHO05D005729 3.6e-94 349.4 390 53.6
CAN.G3313.1 Capsicum annuum HOM05D004867 ORTHO05D005729 3.6e-94 349.4 390 53.6
Peaxi162Scf00058g00820 Petunia axillaris HOM05D004867 ORTHO05D005729 2.3e-88 330.1 381 51.4
Oeu046529.3 Olea europaea HOM05D004867 ORTHO05D005729 4.0e-85 319.3 384 52.1
Peaxi162Scf00081g00024 Petunia axillaris HOM05D004867 ORTHO05D005729 1.5e-84 317.4 376 52.1
Oeu013590.1 Olea europaea HOM05D004867 ORTHO05D005729 4.6e-81 305.8 389 50.1
SalBow5G2297 Salvia bowleyana HOM05D004867 ORTHO05D005729 1.3e-80 304.3 391 50.4
Cfa010718 Carpinus fangiana HOM05D004867 ORTHO05D005729 5.6e-79 298.9 391 48.3
CSS0003709 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 7.3e-79 298.5 393 50.6
Rhsim01G0132300 Rhododendron simsii HOM05D004867 ORTHO05D005729 2.1e-78 297.0 391 48.6
QL04p000390 Quercus lobata HOM05D004867 ORTHO05D005729 4.7e-78 295.8 379 48.8
Haze_03260 Corylus avellana HOM05D004867 ORTHO05D005729 1.1e-77 294.7 392 48.2
QL04p002433 Quercus lobata HOM05D004867 ORTHO05D005729 3.1e-77 293.1 379 48.3
TAR369G0777 Trochodendron aralioides HOM05D004867 ORTHO05D005729 4.0e-77 292.7 390 48.7
FvH4_7g00210 Fragaria vesca HOM05D004867 ORTHO05D005729 2.0e-76 290.4 383 47.5
Prupe.2G004800 Prunus persica HOM05D004867 ORTHO05D005729 4.4e-76 289.3 393 46.3
CiPaw.13G001300 Carya illinoinensis HOM05D004867 ORTHO05D005729 1.3e-75 287.7 392 47.4
Thecc.01G415900 Theobroma cacao HOM05D004867 ORTHO05D005729 1.7e-75 287.3 380 48.7
CSS0017046 Camellia sinensis var. sinensis HOM05D004867 ORTHO05D005729 3.8e-75 286.2 395 48.9
ECA234G3341 Erigeron canadensis HOM05D004867 ORTHO05D005729 4.9e-75 285.8 378 47.9
FAN03G1960 Fragaria x ananassa HOM05D004867 ORTHO05D005729 6.4e-75 285.4 381 47.2
FAN06G4114 Fragaria x ananassa HOM05D004867 ORTHO05D005729 6.4e-75 285.4 381 47.2
FAN10G1317 Fragaria x ananassa HOM05D000038 ORTHO05D005729 8.4e-75 285.0 380 47.1
RcHm_v2.0_Chr1g0313621 Rosa chinensis HOM05D004867 ORTHO05D005729 8.4e-75 285.0 384 46.9
Nn2g15647 Nelumbo nucifera HOM05D004867 ORTHO05D005729 5.4e-74 282.3 395 45.8
Atru.chr11.2686 Acer truncatum HOM05D004867 ORTHO05D005729 7.1e-74 282.0 389 47.0
DCAR_029621 Daucus carota HOM05D004867 ORTHO05D005729 9.3e-74 281.6 380 47.4
Ciclev10030862m.g Citrus clementina HOM05D004867 ORTHO05D005729 6.0e-73 278.9 390 46.4
GSVIVG01001400001 Vitis vinifera HOM05D004867 ORTHO05D005729 6.0e-73 278.9 393 49.9
FAN01G2199 Fragaria x ananassa HOM05D004867 ORTHO05D005729 1.0e-72 278.1 383 47.0
CANSAT11G0209 Cannabis sativa HOM05D004867 ORTHO05D005729 1.7e-72 277.3 396 47.0
Actinidia21571 Actinidia chinensis HOM05D004867 ORTHO05D005729 5.1e-72 275.8 345 51.6
Eucgr.I00278 Eucalyptus grandis HOM05D004867 ORTHO05D005729 2.5e-71 273.5 391 45.5
SGA_v2.0_scaffold260G45878 Striga asiatica HOM05D004867 ORTHO05D005729 2.5e-71 273.5 385 49.1
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 1.6e-70 270.8 381 47.0
SGA_v2.0_scaffold5G03115 Striga asiatica HOM05D004867 ORTHO05D005729 2.8e-70 270.0 396 47.2
Duzib138G1711 Durio zibethinus HOM05D004867 ORTHO05D005729 9.0e-69 265.0 381 44.9
Lj7A565T27 Lonicera japonica HOM05D004867 ORTHO05D005729 1.2e-68 264.6 390 47.7
Cpa.g.sc189.30 Carica papaya HOM05D004867 ORTHO05D005729 2.6e-68 263.5 386 45.3
Migut.B01348 Erythranthe guttata HOM05D004867 ORTHO05D005729 4.5e-68 262.7 390 46.4
PGR031G3548 Punica granatum HOM05D004867 ORTHO05D005729 4.5e-68 262.7 394 46.4
arahy.Tifrunner.gnm1.ann1.8L40SG Arachis hypogaea HOM05D004867 ORTHO05D005729 5.8e-68 262.3 385 44.9
Phvul.005G063700 Phaseolus vulgaris HOM05D004867 ORTHO05D005729 8.4e-67 258.5 383 46.0
COL.COLO4_23912 Corchorus olitorius HOM05D001227 ORTHO05D005729 2.4e-66 256.9 382 45.8
VMungo1080G0666 Vigna mungo HOM05D004867 ORTHO05D005729 2.4e-66 256.9 383 45.7
MD14G1085700 Malus domestica HOM05D004867 ORTHO05D005729 1.2e-65 254.6 338 47.0
Manes.07G001200 Manihot esculenta HOM05D004867 ORTHO05D005729 8.7e-64 248.4 392 43.6
TWI53G1678 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 1.5e-63 247.7 386 44.8
Lj3g0015556 Lotus japonicus HOM05D004867 ORTHO05D005729 4.8e-62 242.7 383 42.0
Hund24874 Selenicereus undatus HOM05D004867 ORTHO05D005729 6.2e-62 242.3 389 42.9
Glyma.08G150000 Glycine max HOM05D004867 ORTHO05D005729 1.4e-61 241.1 387 43.7
Lalb_Chr25g0283491 Lupinus albus HOM05D004867 ORTHO05D005729 2.4e-61 240.4 367 43.1
TWI73G0181 Tripterygium wilfordii HOM05D004867 ORTHO05D005729 6.9e-61 238.8 391 42.2
Potri.001G228100 Populus trichocarpa HOM05D004867 ORTHO05D005729 2.9e-59 233.4 383 44.4
PSO384G4425 Papaver somniferum HOM05D004867 ORTHO05D005729 4.9e-59 232.6 377 44.6
PSO339G0402 Papaver somniferum HOM05D004867 ORTHO05D005729 3.2e-58 229.9 348 44.0
Sc01g0010400 Simmondsia chinensis HOM05D004867 ORTHO05D005729 4.2e-58 229.6 378 44.2
Gohir.D08G062800 Gossypium hirsutum HOM05D004867 ORTHO05D005729 2.7e-57 226.9 384 42.7
AUR62008272 Chenopodium quinoa HOM05D004867 ORTHO05D005729 1.0e-56 224.9 388 43.0
Gohir.A08G053200 Gossypium hirsutum HOM05D004867 ORTHO05D005729 1.5e-55 221.1 343 44.9
Ah.13g072190 Amaranthus hybridus HOM05D004867 ORTHO05D005729 4.3e-55 219.5 391 38.6
AUR62031032 Chenopodium quinoa HOM05D004867 ORTHO05D005729 4.3e-55 219.5 388 42.5
Gorai.004G065000 Gossypium raimondii HOM05D004867 ORTHO05D005729 9.6e-55 218.4 343 44.3
Psat5g206720 Pisum sativum HOM05D004867 ORTHO05D005729 1.3e-54 218.0 386 39.1
Aqoxy2G00085 Aquilegia oxysepala HOM05D004867 ORTHO05D005729 1.8e-53 214.2 381 40.9
CsaV3_3G032420 Cucumis sativus L. HOM05D004867 ORTHO05D005729 2.4e-53 213.8 392 43.1
EL10Ac3g04943 Beta vulgaris HOM05D004867 ORTHO05D005729 2.0e-52 210.7 360 41.4
Ca_25995_v3 Cicer arietinum L. HOM05D004867 ORTHO05D005729 7.6e-52 208.8 379 39.1
Sabra16G0136000 Salix brachista HOM05D004867 ORTHO05D005729 1.3e-51 208.0 383 41.8
Duzib133G0042 Durio zibethinus HOM05D004867 ORTHO05D005729 1.7e-51 207.6 380 39.5
Glyma.15G269800 Glycine max HOM05D004867 ORTHO05D005729 2.2e-51 207.2 386 39.6
MELO3C023945.2 Cucumis melo HOM05D004867 ORTHO05D005729 2.9e-51 206.8 390 42.8
EL10Ac5g10816 Beta vulgaris HOM05D004867 ORTHO05D005729 3.8e-51 206.5 370 41.6
ClCG10G012610 Citrullus lanatus HOM05D004867 ORTHO05D005729 8.4e-51 205.3 392 42.9
Medtr3g026250 Medicago truncatula HOM05D004867 ORTHO05D005729 1.4e-50 204.5 386 39.4
Sp4g15230 Schrenkiella parvula HOM05D004867 ORTHO05D005729 2.1e-49 200.7 395 36.7
Sed0025822 Sechium edule HOM05D004867 ORTHO05D005729 5.1e-48 196.1 394 40.4
HanXRQChr17g0560591 Helianthus annuus HOM05D004867 ORTHO05D005729 3.3e-47 193.4 386 40.4
Aa31LG5G4500 Aethionema arabicum HOM05D004867 ORTHO05D005729 1.3e-46 191.4 390 39.0
ATR0605G176 Amborella trichopoda HOM05D004867 ORTHO05D005729 1.3e-46 191.4 411 36.3
TPR.G12241 Trifolium pratense HOM05D004867 ORTHO05D005729 1.1e-45 188.3 375 38.4
Lsat_1_v5_gn_4_46360 Lactuca sativa HOM05D001227 ORTHO05D005729 5.3e-45 186.0 380 38.4
Sed0010975 Sechium edule HOM05D004867 ORTHO05D005729 5.3e-45 186.0 388 39.9
Carub.0004s1428 Capsella rubella HOM05D004867 ORTHO05D005729 7.6e-44 182.2 351 38.2
THA.LOC104801018 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 2.9e-43 180.3 396 34.6
Dinv43921 Davidia involucrata HOM05D004867 ORTHO05D005729 1.0e-40 171.8 163 61.3
CARHR126800 Cardamine hirsuta HOM05D004867 ORTHO05D005729 6.7e-40 169.1 393 36.6
Zm00001eb183460 Zea mays HOM05D004867 ORTHO05D005729 1.1e-39 168.3 381 38.6
BcaB01g03940 Brassica carinata HOM05D004867 ORTHO05D005729 3.7e-38 163.3 342 36.8
Thhalv10016354m.g Eutrema salsugineum HOM05D004867 ORTHO05D005729 2.0e-36 157.5 399 34.6
AT2G32850 Arabidopsis thaliana HOM05D004867 ORTHO05D005729 2.6e-36 157.1 395 33.2
THA.LOC104816028 Tarenaya hassleriana HOM05D004867 ORTHO05D005729 4.5e-36 156.4 392 35.2
unitig_749.g13484 Utricularia gibba HOM05D004867 ORTHO05D005729 4.5e-36 156.4 224 44.6
C04p16700 Brassica napus HOM05D004867 ORTHO05D005729 3.8e-35 153.3 382 33.2
AL4G28350 Arabidopsis lyrata HOM05D004867 ORTHO05D005729 6.5e-35 152.5 405 33.6
BcaC01g05864 Brassica carinata HOM05D004867 ORTHO05D005729 1.4e-34 151.4 380 35.8
Zm00001eb094370 Zea mays HOM05D004867 ORTHO05D005729 2.3e-32 144.1 361 35.7
C03p21620 Brassica napus HOM05D004867 ORTHO05D005729 2.2e-30 137.5 380 34.7
BolC3t14546H Brassica oleracea HOM05D004867 ORTHO05D005729 2.2e-30 137.5 380 34.7
Zm00001eb344610 Zea mays HOM05D004867 ORTHO05D005729 3.7e-30 136.7 242 41.3
Lj9C624G5 Lonicera japonica HOM05D004867 ORTHO05D005729 1.4e-29 134.8 465 32.0
SEGI_25422 Sequoiadendron giganteum HOM05D004867 ORTHO05D005729 3.1e-29 133.7 441 33.1
Lalb_Chr19g0131991 Lupinus albus HOM05D004867 ORTHO05D005729 7.7e-28 129.0 336 35.1
Actinidia15860 Actinidia chinensis HOM05D004867 ORTHO05D005729 2.9e-27 127.1 206 46.1
A03p18560 Brassica napus HOM05D004867 ORTHO05D005729 3.8e-27 126.7 379 32.2
CDE10G0581 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 6.5e-27 125.9 342 31.9
BraA03t11115Z Brassica rapa HOM05D004867 ORTHO05D005729 3.2e-26 123.6 379 31.9
CDE04G1629 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 2.3e-24 117.5 202 44.6
CDE07G1317 Ceratophyllum demersum HOM05D004867 ORTHO05D005729 5.7e-23 112.8 204 43.6
HPP92_023783 Vanilla planifolia HOM05D004867 ORTHO05D005729 7.4e-23 112.5 222 38.3
HanXRQChr01g0018711 Helianthus annuus HOM05D004867 ORTHO05D005729 5.9e-20 102.8 203 36.5
Mapoly0022s0104 Marchantia polymorpha HOM05D004867 ORTHO05D005729 2.0e-15 87.8 468 26.1
RcHm_v2.0_Chr1g0313561 Rosa chinensis HOM05D004867 ORTHO05D005729 1.1e-10 72.0 73 56.2
GSVIVG01031991001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.5e-10 70.9 76 50.0
SMO147G0308 Selaginella moellendorffii HOM05D004867 ORTHO05D005729 1.2e-09 68.6 138 40.6
QL04p002518 Quercus lobata HOM05D004867 ORTHO05D005729 1.6e-09 68.2 75 45.3
QL04p002463 Quercus lobata HOM05D004867 ORTHO05D005729 8.0e-09 65.9 75 44.0
Pp3c8_15370 Physcomitrium patens HOM05D004867 ORTHO05D005729 2.3e-08 64.3 400 24.8
BcaB02g10502 Brassica carinata HOM05D004867 ORTHO05D005729 2.2e-06 57.8 269 30.1


User provided reference genes

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