Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 2.6e-211 738.4 360 100.0
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 2.0e-131 473.0 344 65.4
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.2e-130 469.5 346 65.0
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 5.0e-130 468.4 356 63.5
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 1.1e-129 467.2 347 66.6
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 7.2e-129 464.5 345 64.3
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 9.4e-129 464.2 350 64.9
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 1.8e-127 459.9 344 64.5
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 3.0e-127 459.1 344 64.2
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 5.7e-126 454.9 345 65.2
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 8.3e-125 451.1 359 61.8
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.4e-124 450.3 356 60.7
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.6e-123 446.8 349 62.5
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.6e-123 446.8 362 62.2
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 2.7e-123 446.0 345 63.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.8e-122 442.2 345 63.5
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 3.8e-122 442.2 345 64.1
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 6.5e-122 441.4 343 63.6
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 6.5e-122 441.4 345 64.6
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 1.1e-121 440.7 345 62.9
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.9e-121 439.9 346 63.3
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 2.5e-121 439.5 346 61.6
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 9.4e-121 437.6 343 63.0
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.1e-120 436.4 345 64.3
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 4.7e-120 435.3 349 60.7
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 6.1e-120 434.9 345 61.7
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.0e-119 434.1 349 62.2
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-119 433.7 355 62.0
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 6.8e-119 431.4 348 60.6
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 8.8e-119 431.0 348 61.5
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.5e-118 430.3 353 60.1
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 2.0e-118 429.9 347 61.1
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 2.0e-118 429.9 345 60.0
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.4e-118 429.1 346 61.6
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 3.4e-118 429.1 349 61.3
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 1.3e-117 427.2 344 60.8
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.7e-117 426.8 348 59.5
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.7e-117 426.8 322 66.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.2e-117 426.4 343 59.5
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.8e-117 426.0 351 59.5
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 6.3e-117 424.9 351 59.5
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.4e-116 423.7 328 63.4
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.4e-116 422.9 351 59.3
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 3.1e-116 422.5 345 59.7
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 9.1e-116 421.0 328 63.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 9.1e-116 421.0 328 63.4
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.6e-115 420.2 344 60.8
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 7.7e-115 417.9 364 58.8
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 8.6e-114 414.5 347 60.8
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 3.3e-113 412.5 347 60.5
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 5.5e-113 411.8 346 61.0
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.2e-112 410.6 347 58.5
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.1e-112 409.8 348 56.9
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 3.6e-112 409.1 345 58.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.0e-111 407.5 349 57.9
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.4e-111 407.1 326 59.8
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.0e-111 406.0 328 61.3
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 8.9e-111 404.4 349 57.6
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.2e-110 404.1 345 57.4
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 4.4e-110 402.1 324 60.5
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 4.4e-110 402.1 341 59.8
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 2.2e-109 399.8 365 52.6
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 2.2e-109 399.8 343 58.3
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.9e-109 399.4 327 59.6
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 4.9e-109 398.7 347 57.3
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 8.3e-109 397.9 348 57.2
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 8.3e-109 397.9 348 55.5
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.4e-108 397.1 312 66.0
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.4e-108 396.4 348 55.2
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.4e-108 396.4 362 57.7
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 9.2e-108 394.4 348 54.6
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.6e-107 393.7 348 54.0
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 7.8e-107 391.3 336 58.3
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 4.3e-105 385.6 346 53.8
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 4.3e-105 385.6 346 53.8
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.3e-105 384.8 347 57.3
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 9.5e-105 384.4 348 53.7
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.2e-104 384.0 379 51.7
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 2.8e-104 382.9 272 71.0
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 4.7e-104 382.1 348 53.4
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.0e-103 379.0 342 56.4
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 6.8e-103 378.3 325 58.8
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 3.7e-101 372.5 370 50.3
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.1e-100 370.9 339 56.3
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.4e-100 369.8 275 64.7
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.0e-98 362.1 255 70.6
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.3e-97 359.0 251 71.3
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 4.7e-96 355.5 341 52.8
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.3e-95 353.2 329 54.1
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 8.9e-95 351.3 343 53.9
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 2.1e-91 340.1 311 56.3
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 2.7e-91 339.7 330 51.5
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 4.3e-89 332.4 347 52.4
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.8e-88 329.7 304 56.6
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 1.3e-85 320.9 341 50.1
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 4.9e-85 318.9 261 62.1
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 3.2e-84 316.2 362 48.9
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.9e-82 309.3 277 58.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.1e-80 303.5 248 60.5
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 5.8e-70 268.9 310 48.7
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 7.1e-68 261.9 260 51.9
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 3.9e-66 256.1 236 51.7
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.7e-61 240.7 182 58.2
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 6.4e-61 238.8 189 62.4
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 1.9e-60 237.3 213 57.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 7.1e-60 235.3 352 39.2
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 3.1e-55 219.9 241 50.6
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.1e-41 174.9 130 58.5
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 3.8e-37 159.8 126 61.9
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.9e-36 157.5 309 36.2
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 6.3e-32 142.5 100 66.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.2e-30 138.3 144 47.9
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 2.2e-29 134.0 197 39.1
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 6.1e-19 99.4 73 64.4
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-15 88.6 70 58.6
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 1.8e-15 87.8 132 36.4
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 3.8e-13 80.1 84 56.0


User provided reference genes

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