Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 6.6e-74 280.8 160 100.0
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 4.9e-21 105.1 164 47.0
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 7.1e-20 101.3 95 64.2
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 3.5e-19 99.0 95 63.2
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 1.0e-18 97.4 87 65.5
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 2.3e-18 96.3 83 66.3
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 3.0e-18 95.9 161 48.4
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 1.3e-16 90.5 151 44.4
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 6.2e-16 88.2 164 41.5
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 3.1e-15 85.9 69 69.6
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 4.0e-15 85.5 161 43.5
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 9.0e-15 84.3 106 52.8
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 1.5e-14 83.6 91 56.0
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 1.5e-14 83.6 97 52.6
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 7.6e-14 81.3 77 58.4
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 7.6e-14 81.3 75 62.7
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 1.3e-13 80.5 137 46.7
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 1.7e-13 80.1 170 42.9
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 2.9e-13 79.3 103 52.4
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 2.9e-13 79.3 76 60.5
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 3.8e-13 79.0 160 40.0
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 4.9e-13 78.6 94 53.2
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 4.9e-13 78.6 92 50.0
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 8.4e-13 77.8 77 59.7
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 2.5e-12 76.3 104 51.0
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 3.2e-12 75.9 93 51.6
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 4.2e-12 75.5 74 58.1
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 7.1e-12 74.7 74 59.5
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 1.2e-11 73.9 83 55.4
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.6e-11 73.6 175 38.9
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 2.1e-11 73.2 71 62.0
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 2.1e-11 73.2 71 60.6
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 2.7e-11 72.8 78 56.4
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 4.6e-11 72.0 90 52.2
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.0e-10 70.9 89 52.8
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.3e-10 70.5 59 66.1
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 1.8e-10 70.1 83 50.6
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 3.9e-10 68.9 137 43.1
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 6.7e-10 68.2 134 43.3
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 8.7e-10 67.8 77 54.5
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.5e-09 67.0 70 55.7
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 1.9e-09 66.6 98 44.9
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 2.5e-09 66.2 77 51.9
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 2.5e-09 66.2 69 56.5
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 3.3e-09 65.9 78 51.3
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 1.3e-08 63.9 80 47.5
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 1.6e-08 63.5 75 52.0
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 1.6e-08 63.5 57 63.2
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 4.8e-08 62.0 71 52.1
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 1.1e-07 60.8 61 55.7
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 1.1e-07 60.8 144 38.2
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 1.4e-07 60.5 96 43.8
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 1.8e-07 60.1 78 52.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 1.8e-07 60.1 71 49.3
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 4.1e-07 58.9 78 50.0
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.2e-06 57.4 61 54.1
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.2e-06 57.4 61 54.1
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.2e-06 57.4 61 54.1
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 2.0e-06 56.6 97 41.2
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 5.9e-06 55.1 90 44.4
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.0e-05 54.3 61 50.8


User provided reference genes

Program Settings