Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g22900 Coffea canephora HOM05D005162 ORTHO05D007064 4.8e-191 671.0 339 100.0
Peaxi162Scf00011g00742 Petunia axillaris HOM05D005162 ORTHO05D007064 1.7e-164 582.8 339 83.8
Thecc.02G090800 Theobroma cacao HOM05D005162 ORTHO05D007064 1.4e-161 573.2 330 84.8
MSTRG.16505 Avicennia marina HOM05D005162 ORTHO05D007064 2.3e-161 572.4 336 82.4
ECA234G0102 Erigeron canadensis HOM05D005162 ORTHO05D007064 5.2e-161 571.2 323 85.1
Aqoxy6G00135 Aquilegia oxysepala HOM05D005162 ORTHO05D007064 5.7e-160 567.8 329 84.5
Duzib132G0282 Durio zibethinus HOM05D005162 ORTHO05D007064 1.3e-159 566.6 332 82.5
Gohir.A03G192500 Gossypium hirsutum HOM05D005162 ORTHO05D007064 1.3e-159 566.6 331 83.1
Manes.07G021300 Manihot esculenta HOM05D005162 ORTHO05D007064 1.7e-159 566.2 331 83.1
COL.COLO4_11752 Corchorus olitorius HOM05D005162 ORTHO05D007064 2.2e-159 565.8 331 84.3
Gohir.D02G213500 Gossypium hirsutum HOM05D005162 ORTHO05D007064 3.7e-159 565.1 331 83.1
Gorai.005G241400 Gossypium raimondii HOM05D005162 ORTHO05D007064 6.3e-159 564.3 331 83.1
TAR376G0995 Trochodendron aralioides HOM05D005162 ORTHO05D007064 1.4e-158 563.1 325 83.7
Eucgr.G00398 Eucalyptus grandis HOM05D005162 ORTHO05D007064 4.1e-158 561.6 322 83.9
CsaV3_5G029940 Cucumis sativus L. HOM05D005162 ORTHO05D007064 7.0e-158 560.8 328 83.8
ClCG11G013410 Citrullus lanatus HOM05D005162 ORTHO05D007064 9.1e-158 560.5 329 83.0
HanXRQChr10g0294681 Helianthus annuus HOM05D005162 ORTHO05D007064 1.2e-157 560.1 332 81.6
THA.LOC104803191 Tarenaya hassleriana HOM05D005162 ORTHO05D007064 1.2e-157 560.1 324 83.3
MELO3C011838.2 Cucumis melo HOM05D005162 ORTHO05D007064 2.0e-157 559.3 328 83.8
SalBow8G3448 Salvia bowleyana HOM05D005162 ORTHO05D007064 2.0e-157 559.3 339 80.8
PSO170G6393 Papaver somniferum HOM05D005162 ORTHO05D007064 5.9e-157 557.8 336 82.1
Lsat_1_v5_gn_5_105901 Lactuca sativa HOM05D005162 ORTHO05D007064 7.7e-157 557.4 328 83.2
Ciclev10001794m.g Citrus clementina HOM05D005162 ORTHO05D007064 3.8e-156 555.1 317 84.2
Nitab4.5_0000948g0210 Nicotiana tabacum HOM05D005162 ORTHO05D007064 6.5e-156 554.3 373 74.5
Migut.B00805 Erythranthe guttata HOM05D005162 ORTHO05D007064 8.5e-156 553.9 336 81.0
DCAR_006685 Daucus carota HOM05D005162 ORTHO05D007064 1.1e-155 553.5 336 81.2
PGSC0003DMG400024901 Solanum tuberosum HOM05D005162 ORTHO05D007064 1.5e-155 553.1 336 80.4
Potri.004G219300 Populus trichocarpa HOM05D005162 ORTHO05D007064 1.9e-155 552.7 333 80.5
CANSAT54G0278 Cannabis sativa HOM05D005162 ORTHO05D007064 2.5e-155 552.4 337 80.4
PGR042G0281 Punica granatum HOM05D005162 ORTHO05D007064 3.2e-155 552.0 319 83.4
Sed0011379 Sechium edule HOM05D005162 ORTHO05D007064 3.2e-155 552.0 317 83.9
Solyc01g103850.4 Solanum lycopersicum HOM05D005162 ORTHO05D007064 5.5e-155 551.2 334 80.5
Atru.chr6.699 Acer truncatum HOM05D005162 ORTHO05D007064 7.2e-155 550.8 328 81.1
Sopen01g046230 Solanum pennellii HOM05D005162 ORTHO05D007064 7.2e-155 550.8 336 80.1
Cpa.g.sc38.29 Carica papaya HOM05D005162 ORTHO05D007064 1.2e-154 550.1 331 79.5
Rhsim11G0126200 Rhododendron simsii HOM05D005162 ORTHO05D007064 2.7e-154 548.9 380 73.7
AT4G06599 Arabidopsis thaliana HOM05D005162 ORTHO05D007064 8.0e-154 547.4 341 78.6
Sc07g0004980 Simmondsia chinensis HOM05D005162 ORTHO05D007064 8.0e-154 547.4 340 80.3
CSS0000837 Camellia sinensis var. sinensis HOM05D005162 ORTHO05D007064 1.8e-153 546.2 331 80.4
AL6G41220 Arabidopsis lyrata HOM05D005162 ORTHO05D007064 4.0e-153 545.0 341 78.3
arahy.Tifrunner.gnm1.ann1.3Y07W7 Arachis hypogaea HOM05D005162 ORTHO05D007064 5.2e-153 544.7 333 79.9
Carub.0006s2628 Capsella rubella HOM05D005162 ORTHO05D007064 6.7e-153 544.3 327 80.1
CiPaw.05G051000 Carya illinoinensis HOM05D005162 ORTHO05D007064 6.7e-153 544.3 333 81.4
arahy.Tifrunner.gnm1.ann1.R3RHS8 Arachis hypogaea HOM05D005162 ORTHO05D007064 3.3e-152 542.0 333 79.3
Nn5g27579 Nelumbo nucifera HOM05D005162 ORTHO05D007064 7.5e-152 540.8 324 79.3
Cfa005485 Carpinus fangiana HOM05D005162 ORTHO05D007064 2.2e-151 539.3 332 80.7
Ah.03g137150 Amaranthus hybridus HOM05D005162 ORTHO05D007064 2.8e-151 538.9 320 80.6
Aa31LG3G14040 Aethionema arabicum HOM05D005162 ORTHO05D007064 3.7e-151 538.5 340 78.2
FAN18G1533 Fragaria x ananassa HOM05D005162 ORTHO05D007064 3.7e-151 538.5 322 80.1
FvH4_5g28710 Fragaria vesca HOM05D005162 ORTHO05D007064 4.8e-151 538.1 322 80.1
RcHm_v2.0_Chr7g0220871 Rosa chinensis HOM05D005162 ORTHO05D007064 4.8e-151 538.1 340 77.4
Sp7g16990 Schrenkiella parvula HOM05D005162 ORTHO05D007064 8.2e-151 537.3 332 78.9
HPP92_001076 Vanilla planifolia HOM05D005162 ORTHO05D007064 1.1e-150 537.0 349 75.9
CARHR287310 Cardamine hirsuta HOM05D005162 ORTHO05D007064 1.4e-150 536.6 339 78.5
FAN04G0484 Fragaria x ananassa HOM05D005162 ORTHO05D007064 5.3e-150 534.6 335 77.0
Prupe.1G576000 Prunus persica HOM05D005162 ORTHO05D007064 7.0e-150 534.3 322 80.4
BraA01t01942Z Brassica rapa HOM05D005162 ORTHO05D007064 9.1e-150 533.9 336 77.4
A01p20180 Brassica napus HOM05D005162 ORTHO05D007064 2.0e-149 532.7 336 78.0
BcaC09g50447 Brassica carinata HOM05D005162 ORTHO05D007064 1.0e-148 530.4 336 77.7
C01p25320 Brassica napus HOM05D005162 ORTHO05D007064 1.0e-148 530.4 336 77.7
Potri.003G011300 Populus trichocarpa HOM05D005162 ORTHO05D007064 1.0e-148 530.4 325 79.7
QL02p099940 Quercus lobata HOM05D005162 ORTHO05D007064 1.7e-148 529.6 318 81.1
Actinidia39017 Actinidia chinensis HOM05D005162 ORTHO05D007064 2.2e-148 529.3 332 78.6
Lalb_Chr07g0185841 Lupinus albus HOM05D005162 ORTHO05D007064 2.2e-148 529.3 325 78.2
Thhalv10025663m.g Eutrema salsugineum HOM05D005162 ORTHO05D007064 2.9e-148 528.9 332 77.7
Psat7g063440 Pisum sativum HOM05D005162 ORTHO05D007064 2.9e-148 528.9 336 77.1
Sabra01G0166400 Salix brachista HOM05D005162 ORTHO05D007064 5.0e-148 528.1 367 71.9
ATR1134G078 Amborella trichopoda HOM05D005162 ORTHO05D007064 8.5e-148 527.3 330 79.1
AUR62041110 Chenopodium quinoa HOM05D005162 ORTHO05D007064 1.1e-147 526.9 376 70.5
MD15G1431000 Malus domestica HOM05D005162 ORTHO05D007064 1.5e-147 526.6 322 79.8
Phvul.002G248400 Phaseolus vulgaris HOM05D005162 ORTHO05D007064 1.5e-147 526.6 320 79.4
BolC1t02482H Brassica oleracea HOM05D005162 ORTHO05D007064 2.5e-147 525.8 334 77.5
FAN08G0254 Fragaria x ananassa HOM05D005162 ORTHO05D007064 4.2e-147 525.0 348 74.1
SGA_v2.0_scaffold338G49226 Striga asiatica HOM05D005162 ORTHO05D007064 1.6e-146 523.1 338 76.3
VMungo0251G3523 Vigna mungo HOM05D005162 ORTHO05D007064 1.6e-146 523.1 333 76.3
Lj4g0017883 Lotus japonicus HOM05D005162 ORTHO05D007064 2.7e-146 522.3 333 74.8
TWI59G0454 Tripterygium wilfordii HOM05D005162 ORTHO05D007064 8.0e-146 520.8 319 81.5
TPR.G6800 Trifolium pratense HOM05D005162 ORTHO05D007064 1.4e-145 520.0 336 75.6
unitig_749.g14130 Utricularia gibba HOM05D005162 ORTHO05D007064 3.0e-145 518.8 320 78.1
Dinv01848 Davidia involucrata HOM05D005162 ORTHO05D007064 6.8e-145 517.7 326 79.8
Sabra03G0006800 Salix brachista HOM05D005162 ORTHO05D007064 6.8e-145 517.7 323 78.9
Sabra03G0007400 Salix brachista HOM05D005162 ORTHO05D007064 8.8e-145 517.3 323 78.9
FAN13G0306 Fragaria x ananassa HOM05D005162 ORTHO05D007064 1.5e-144 516.5 348 73.6
Ca_17836_v3 Cicer arietinum L. HOM05D005162 ORTHO05D007064 9.8e-144 513.8 333 75.7
Glyma.05G168000 Glycine max HOM05D005162 ORTHO05D007064 9.8e-144 513.8 320 76.9
Medtr8g088640 Medicago truncatula HOM05D005162 ORTHO05D007064 2.8e-143 512.3 322 77.3
Glyma.08G126400 Glycine max HOM05D005162 ORTHO05D007064 3.7e-143 511.9 327 74.9
Haze_01819 Corylus avellana HOM05D005162 ORTHO05D007064 6.3e-143 511.1 398 68.1
Nitab4.5_0002698g0020 Nicotiana tabacum HOM05D005162 ORTHO05D007064 8.3e-143 510.8 336 75.6
CSS0029208 Camellia sinensis var. sinensis HOM05D005162 ORTHO05D007064 7.0e-142 507.7 331 76.1
BcaNung03473 Brassica carinata HOM05D005162 ORTHO05D007064 2.9e-140 502.3 302 80.1
SMO358G0515 Selaginella moellendorffii HOM05D005162 ORTHO05D007064 4.7e-138 495.0 331 71.6
CDE08G1137 Ceratophyllum demersum HOM05D005162 ORTHO05D007064 2.0e-133 479.6 316 74.1
BcaNung00113 Brassica carinata HOM05D005162 ORTHO05D007064 1.0e-132 477.2 336 71.7
Os01g0875400 Oryza sativa ssp. japonica HOM05D005162 ORTHO05D007064 2.1e-130 469.5 352 67.3
Zm00001eb366430 Zea mays HOM05D005162 ORTHO05D007064 2.2e-127 459.5 343 67.1
Pp3c1_27970 Physcomitrium patens HOM05D005162 ORTHO05D007064 1.4e-126 456.8 334 68.3
Mapoly0019s0035 Marchantia polymorpha HOM05D005162 ORTHO05D007064 2.0e-125 453.0 319 68.0
GSVIVG01023290001 Vitis vinifera HOM05D005162 ORTHO05D007064 1.1e-121 440.7 250 84.8
vmacro01733 Vaccinium macrocarpon HOM05D005162 ORTHO05D007064 2.6e-120 436.0 247 83.8
Oeu032113.1 Olea europaea HOM05D005162 ORTHO05D007064 2.2e-119 433.0 247 82.2
Lj5C260G15 Lonicera japonica HOM05D005162 ORTHO05D007064 2.9e-119 432.6 242 84.7
HanXRQChr10g0294691 Helianthus annuus HOM05D005162 ORTHO05D007064 2.1e-117 426.4 246 83.3
CDE08G1585 Ceratophyllum demersum HOM05D005162 ORTHO05D007064 3.1e-113 412.5 314 67.5
CAN.G798.38 Capsicum annuum HOM05D005162 ORTHO05D007064 2.0e-112 409.8 243 78.6
Sabra03G0007100 Salix brachista HOM05D005162 ORTHO05D007064 7.5e-112 407.9 369 60.7
CsaV3_5G029930 Cucumis sativus L. HOM05D005162 ORTHO05D007064 1.7e-111 406.8 318 65.1
MBI09_g07124_MAGBIO Magnolia biondii HOM05D005162 ORTHO05D007064 2.2e-111 406.4 338 64.8
EL10Ac6g13975 Beta vulgaris HOM05D005162 ORTHO05D007064 2.7e-109 399.4 329 63.5
MCO16G506 Micromonas commoda HOM05D005162 ORTHO05D007064 2.4e-97 359.8 319 59.2
SEGI_09590 Sequoiadendron giganteum HOM05D005162 ORTHO05D007064 2.4e-89 333.2 193 81.3
BcaNung03475 Brassica carinata HOM05D005162 ORTHO05D007064 3.2e-86 322.8 232 68.5
Lsat_1_v5_gn_1_60880 Lactuca sativa HOM05D005162 ORTHO05D007064 2.4e-73 280.0 206 70.4
Haze_26359 Corylus avellana HOM05D005162 ORTHO05D007064 1.6e-69 267.3 321 44.5
Cre04.g228900 Chlamydomonas reinhardtii HOM05D005162 ORTHO05D007064 1.3e-68 264.2 267 51.3
PRCOL_00006478 Prasinoderma coloniale HOM05D005162 ORTHO05D007064 3.3e-67 259.6 342 45.3
Oeu049835.1 Olea europaea HOM05D005162 ORTHO05D007064 8.2e-66 255.0 135 86.7
CBR_g37945 Chara braunii HOM05D005162 ORTHO05D000497 3.1e-65 253.1 178 66.9
Hma1.2p1_1108F.1_g257830 Hydrangea macrophylla HOM05D005162 ORTHO05D007064 9.0e-65 251.5 138 85.5
AagrBONN_evm.TU.Sc2ySwM_368.1617 Anthoceros agrestis HOM05D005162 ORTHO05D007064 3.8e-63 246.1 245 53.5
EL10As26g24245 Beta vulgaris HOM05D005162 ORTHO05D007064 1.9e-54 217.2 128 78.1
FAN14G4428 Fragaria x ananassa HOM05D005162 ORTHO05D007064 5.3e-41 172.6 130 68.5
FvH4_6g22010 Fragaria vesca HOM05D005162 ORTHO05D007064 1.6e-40 171.0 130 67.7
FvH4_1g28920 Fragaria vesca HOM05D005162 ORTHO05D012874 6.5e-39 165.6 120 69.2
EL10Ac9g22557 Beta vulgaris HOM05D005162 ORTHO05D007064 3.2e-38 163.3 106 79.2
FAN09G4282 Fragaria x ananassa HOM05D005162 ORTHO05D007064 7.2e-38 162.2 143 60.1
FAN06G2257 Fragaria x ananassa HOM05D005162 ORTHO05D007064 8.0e-37 158.7 123 66.7
FAN06G4878 Fragaria x ananassa HOM05D005162 ORTHO05D007064 8.0e-37 158.7 123 66.7
CBR_g37944 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-36 157.9 162 51.9
FvH4_7g16790 Fragaria vesca HOM05D005162 ORTHO05D007064 8.8e-36 155.2 123 65.0
MD08G1239400 Malus domestica HOM05D005162 ORTHO05D007064 4.5e-32 142.9 106 64.2
Lsat_1_v5_gn_1_60640 Lactuca sativa HOM05D005162 ORTHO05D007064 1.7e-31 141.0 199 46.2
FvH4_7g16160 Fragaria vesca HOM05D005162 ORTHO05D007064 1.4e-25 121.3 93 67.7
BraA03t14123Z Brassica rapa HOM05D005162 ORTHO05D007064 7.7e-24 115.5 75 74.7
Solyc01g058590.1 Solanum lycopersicum HOM05D005162 ORTHO05D027610 3.3e-22 110.2 82 70.7
Zm00001eb146120 Zea mays HOM05D005162 ORTHO05D007064 1.2e-21 108.2 80 63.8
Haze_10322 Corylus avellana HOM05D002370 ORTHO05D003878 4.7e-21 106.3 67 82.1
Sopen01g024260 Solanum pennellii HOM05D005162 ORTHO05D027610 1.8e-20 104.4 91 61.5
Lsat_1_v5_gn_1_60800 Lactuca sativa HOM05D005162 ORTHO05D007064 1.5e-19 101.3 188 39.9
MD08G1239500 Malus domestica HOM05D005162 ORTHO05D007064 9.8e-19 98.6 61 77.0
C07p48650 Brassica napus HOM05D005162 ORTHO05D007064 2.8e-18 97.1 66 75.8
PRCOL_00002191 Prasinoderma coloniale HOM05D005162 ORTHO05D333607 1.6e-16 91.3 199 32.2
BcaB01g02499 Brassica carinata HOM05D005162 ORTHO05D027610 3.5e-16 90.1 62 71.0
Cfa012958 Carpinus fangiana HOM05D005162 ORTHO05D027610 4.7e-13 79.7 53 71.7
BcaB07g32185 Brassica carinata HOM05D005162 ORTHO05D000065 2.4e-09 67.4 51 60.8
BcaB05g22040 Brassica carinata HOM05D005162 ORTHO05D094949 7.0e-09 65.9 95 44.2
SMO115G0326 Selaginella moellendorffii HOM05D011895 ORTHO05D374257 6.0e-08 62.8 164 28.7
CDE02G4559 Ceratophyllum demersum HOM05D000243 ORTHO05D000278 7.8e-08 62.4 54 61.1
SMO115G0039 Selaginella moellendorffii HOM05D005162 ORTHO05D376677 3.9e-07 60.1 163 29.4
SMO166G0042 Selaginella moellendorffii HOM05D003514 ORTHO05D377786 5.0e-07 59.7 171 27.5
SMO367G1061 Selaginella moellendorffii HOM05D001132 ORTHO05D003115 8.6e-07 58.9 164 29.3
LjContig00141g0011565 Lotus japonicus HOM05D005162 ORTHO05D236084 3.3e-06 57.0 60 55.0


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