Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.6e-250 869.0 441 100.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 3.7e-151 538.9 394 70.3
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 7.0e-150 534.6 383 71.0
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.2e-148 529.6 383 70.5
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 8.5e-148 527.7 429 65.7
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 8.5e-148 527.7 358 74.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.4e-147 526.9 383 69.7
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 9.4e-147 524.2 424 63.9
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 9.4e-147 524.2 360 71.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.1e-146 523.1 361 73.4
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 4.7e-146 521.9 343 75.5
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.0e-145 520.8 389 68.9
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.4e-145 520.4 435 62.8
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.8e-145 520.0 436 64.0
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.8e-145 520.0 436 63.3
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.8e-145 520.0 366 72.1
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 6.7e-145 518.1 366 72.1
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 8.8e-145 517.7 360 72.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 4.4e-144 515.4 411 64.0
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 7.4e-144 514.6 399 66.7
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 9.7e-144 514.2 429 63.2
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.3e-143 513.8 360 71.7
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.7e-143 513.5 388 67.5
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.7e-143 513.5 358 69.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.7e-143 513.5 367 70.3
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 6.3e-143 511.5 416 64.2
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 8.2e-143 511.1 366 69.4
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.1e-142 510.8 358 69.6
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.8e-142 510.0 363 71.1
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.4e-142 509.6 370 70.3
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.4e-142 509.6 358 69.6
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.1e-142 509.2 371 69.5
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 7.0e-142 508.1 413 65.1
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 7.0e-142 508.1 360 69.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 7.0e-142 508.1 360 69.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 7.0e-142 508.1 396 65.9
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.2e-141 507.3 360 69.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.6e-141 506.9 375 69.3
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 2.0e-141 506.5 358 68.7
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.6e-141 506.1 363 70.0
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 5.9e-141 505.0 366 70.2
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 5.9e-141 505.0 389 66.1
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 7.7e-141 504.6 435 63.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 7.7e-141 504.6 361 68.4
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.7e-140 503.4 363 67.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 5.5e-139 498.4 329 72.0
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.6e-138 496.9 422 64.2
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 2.0e-136 490.0 377 67.6
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 5.7e-136 488.4 340 71.8
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 2.8e-135 486.1 365 66.3
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 4.8e-135 485.3 360 65.8
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.1e-134 484.2 365 68.2
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.1e-134 482.6 357 66.4
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 3.1e-134 482.6 360 66.4
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 3.1e-134 482.6 391 63.4
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 7.0e-134 481.5 360 67.2
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 7.0e-134 481.5 371 67.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 9.1e-134 481.1 360 67.5
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.2e-133 480.7 360 65.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.2e-133 480.7 365 65.8
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.0e-133 479.9 361 68.1
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.0e-133 479.9 357 66.1
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.3e-132 477.2 360 66.7
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.3e-132 477.2 472 57.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.2e-132 476.5 357 65.5
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 2.2e-132 476.5 359 65.2
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.7e-130 469.5 381 62.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 5.2e-129 465.3 379 63.1
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 8.8e-129 464.5 333 70.9
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.4e-128 462.6 359 65.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.4e-128 462.6 427 60.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 5.7e-128 461.8 370 63.2
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 9.8e-128 461.1 357 65.5
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.2e-127 459.9 382 63.6
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 2.0e-125 453.4 390 62.8
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 5.0e-124 448.7 352 64.8
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.0e-121 441.0 389 61.2
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 5.4e-118 428.7 283 74.6
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.0e-116 424.5 357 60.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.7e-116 423.7 521 48.8
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.8e-113 413.7 363 58.4
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.7e-109 399.8 321 66.4
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 3.9e-108 396.0 366 54.1
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 4.4e-104 382.5 306 59.5
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.1e-102 377.9 435 49.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.1e-97 361.3 330 54.5
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 6.8e-97 358.6 370 53.8
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.3e-95 354.4 353 51.0
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-94 351.3 326 53.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 4.7e-90 335.9 285 61.1
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.9e-89 331.6 385 50.1
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.5e-85 319.7 366 51.9
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.0e-84 316.6 235 66.8
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 9.6e-83 311.6 235 66.0
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.3e-67 259.6 310 47.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 7.9e-61 238.8 346 39.9
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.9e-59 234.2 167 71.9
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 5.3e-49 199.5 136 72.8
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 7.7e-48 195.7 127 72.4
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.3e-41 172.9 183 53.6
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 7.4e-35 152.5 133 57.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 3.7e-34 150.2 108 65.7
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.7e-21 107.5 79 64.6
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 4.7e-21 106.7 112 48.2
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 8.0e-21 105.9 127 48.8
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 6.8e-20 102.8 125 44.0
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.5e-19 101.7 345 28.1
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.3e-18 98.6 58 79.3
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 4.8e-18 96.7 79 65.8
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.5e-16 90.5 164 36.6
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 4.2e-14 83.6 99 43.4
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 8.0e-13 79.3 174 33.9
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 6.8e-12 76.3 52 75.0
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 8.8e-12 75.9 333 25.2
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 3.4e-11 73.9 303 25.7
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.4e-09 68.6 219 29.7
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.5e-08 63.5 67 53.7
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 7.7e-08 62.8 34 79.4


User provided reference genes

Program Settings