Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g21000 Coffea canephora HOM05D009780 ORTHO05D011385 5.7e-13 76.3 37 100.0
Migut.B00562 Erythranthe guttata HOM05D009780 ORTHO05D011385 4.1e-11 70.1 37 89.2
Migut.N01092 Erythranthe guttata HOM05D009780 ORTHO05D011385 9.1e-11 68.9 37 89.2
Potri.007G113150 Populus trichocarpa HOM05D009780 ORTHO05D011385 5.9e-10 66.2 37 83.8
Glyma.13G258400 Glycine max HOM05D009780 ORTHO05D011385 1.0e-09 65.5 37 75.7
Glyma.15G057000 Glycine max HOM05D009780 ORTHO05D011385 1.7e-09 64.7 37 75.7
Potri.002G104450 Populus trichocarpa HOM05D009780 ORTHO05D011385 2.9e-09 63.9 37 78.4
Gohir.A02G078100 Gossypium hirsutum HOM05D009780 ORTHO05D011385 6.5e-09 62.8 37 78.4
CsaV3_7G006990 Cucumis sativus L. HOM05D029440 ORTHO05D011385 8.5e-09 62.4 37 78.4
Gohir.D02G085300 Gossypium hirsutum HOM05D009780 ORTHO05D011385 1.1e-08 62.0 37 78.4
Gorai.005G096100 Gossypium raimondii HOM05D009780 ORTHO05D011385 1.1e-08 62.0 37 78.4
Prupe.1G529600 Prunus persica HOM05D009780 ORTHO05D011385 1.4e-08 61.6 37 75.7
CiPaw.05G030800 Carya illinoinensis HOM05D009780 ORTHO05D011385 5.5e-08 59.7 37 73.0
ClCG11G014510 Citrullus lanatus HOM05D009780 ORTHO05D011385 7.2e-08 59.3 37 70.3
Glyma.02G213300 Glycine max HOM05D009780 ORTHO05D011385 2.1e-07 57.8 37 73.0
Cc10_g15740 Coffea canephora HOM05D009780 ORTHO05D011385 3.6e-07 57.0 37 75.7
Haze_10541 Corylus avellana HOM05D002856 ORTHO05D003246 4.7e-07 56.6 36 72.2
Glyma.06G093800 Glycine max HOM05D009780 ORTHO05D011385 4.7e-07 56.6 37 73.0
Potri.017G047750 Populus trichocarpa HOM05D009780 ORTHO05D011385 7.9e-07 55.8 32 84.4
Dinv24158 Davidia involucrata HOM05D002856 ORTHO05D003246 1.4e-06 55.1 32 78.1
Glyma.04G092000 Glycine max HOM05D009780 ORTHO05D011385 1.4e-06 55.1 37 70.3
Carub.0002s0650 Capsella rubella HOM05D009780 ORTHO05D011385 1.8e-06 54.7 37 67.6
Glyma.14G180900 Glycine max HOM05D009780 ORTHO05D011385 2.3e-06 54.3 37 70.3
Phvul.009G144000 Phaseolus vulgaris HOM05D009780 ORTHO05D011385 2.3e-06 54.3 37 67.6
Gohir.D05G267300 Gossypium hirsutum HOM05D009780 ORTHO05D011385 3.0e-06 53.9 37 70.3
Thecc.02G131700 Theobroma cacao HOM05D009780 ORTHO05D011385 3.0e-06 53.9 31 77.4
Gohir.A05G265000 Gossypium hirsutum HOM05D009780 ORTHO05D011385 3.9e-06 53.5 37 70.3
ClCG09G015850 Citrullus lanatus HOM05D002856 ORTHO05D003246 5.1e-06 53.1 31 80.6
Dinv15991 Davidia involucrata HOM05D002856 ORTHO05D003246 5.1e-06 53.1 32 78.1
RhsimUnG0008500 Rhododendron simsii HOM05D002856 ORTHO05D003246 5.1e-06 53.1 31 71.0
Thecc.08G069100 Theobroma cacao HOM05D002856 ORTHO05D003246 6.7e-06 52.8 32 75.0


User provided reference genes

Program Settings