Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g19360 Coffea canephora HOM05D007211 ORTHO05D009060 5.0e-41 170.6 83 100.0
Ca_24347_v3 Cicer arietinum L. HOM05D007211 ORTHO05D009060 1.6e-31 139.0 83 74.7
TPR.G21608 Trifolium pratense HOM05D007211 ORTHO05D009060 3.6e-31 137.9 80 75.0
Psat4g228560 Pisum sativum HOM05D007211 ORTHO05D009060 7.9e-31 136.7 83 73.5
Migut.B00396 Erythranthe guttata HOM05D007211 ORTHO05D009060 1.0e-30 136.3 83 77.1
Medtr5g004970 Medicago truncatula HOM05D007211 ORTHO05D009060 1.4e-30 136.0 80 75.0
Oeu013758.1 Olea europaea HOM05D007211 ORTHO05D009060 2.3e-30 135.2 83 75.9
Oeu029529.1 Olea europaea HOM05D007211 ORTHO05D009060 3.0e-30 134.8 80 75.0
unitig_0.g876 Utricularia gibba HOM05D007211 ORTHO05D009060 3.0e-30 134.8 83 80.7
Actinidia34396 Actinidia chinensis HOM05D007211 ORTHO05D009060 6.7e-30 133.7 80 75.0
AUR62010326 Chenopodium quinoa HOM05D007211 ORTHO05D009060 6.7e-30 133.7 82 76.8
CiPaw.06G168700 Carya illinoinensis HOM05D007211 ORTHO05D009060 8.8e-30 133.3 83 74.7
arahy.Tifrunner.gnm1.ann1.0PG00T Arachis hypogaea HOM05D007211 ORTHO05D009060 1.5e-29 132.5 80 72.5
arahy.Tifrunner.gnm1.ann1.YF4EPK Arachis hypogaea HOM05D007211 ORTHO05D009060 1.5e-29 132.5 80 72.5
EL10Ac9g22259 Beta vulgaris HOM05D007211 ORTHO05D009060 2.0e-29 132.1 80 78.8
Rhsim11G0158600 Rhododendron simsii HOM05D007211 ORTHO05D009060 2.6e-29 131.7 80 73.8
Lj1g0022136 Lotus japonicus HOM05D007211 ORTHO05D009060 3.3e-29 131.3 80 72.5
Rhsim11G0157000 Rhododendron simsii HOM05D007211 ORTHO05D009060 3.3e-29 131.3 80 75.0
Hund00155 Selenicereus undatus HOM05D000364 ORTHO05D009060 3.3e-29 131.3 82 75.6
arahy.Tifrunner.gnm1.ann1.UEWU3Q Arachis hypogaea HOM05D007211 ORTHO05D009060 4.4e-29 131.0 80 71.2
AUR62039062 Chenopodium quinoa HOM05D007211 ORTHO05D009060 5.7e-29 130.6 80 76.2
Prupe.8G136900 Prunus persica HOM05D007211 ORTHO05D009060 5.7e-29 130.6 83 72.3
vmacro01995 Vaccinium macrocarpon HOM05D007211 ORTHO05D009060 5.7e-29 130.6 80 73.8
QL11p032854 Quercus lobata HOM05D007211 ORTHO05D009060 9.7e-29 129.8 80 73.8
Hma1.2p1_1518F.1_g288450 Hydrangea macrophylla HOM05D007211 ORTHO05D009060 2.8e-28 128.3 83 69.9
Haze_10197 Corylus avellana HOM05D007211 ORTHO05D009060 3.7e-28 127.9 80 72.5
Sc14g0001880 Simmondsia chinensis HOM05D007211 ORTHO05D009060 3.7e-28 127.9 80 72.5
GSVIVG01037902001 Vitis vinifera HOM05D007211 ORTHO05D009060 3.7e-28 127.9 80 72.5
MELO3C019551.2 Cucumis melo HOM05D007211 ORTHO05D009060 8.2e-28 126.7 80 72.5
Potri.001G299200 Populus trichocarpa HOM05D007211 ORTHO05D009060 8.2e-28 126.7 80 73.8
PGSC0003DMG400025763 Solanum tuberosum HOM05D007211 ORTHO05D009060 8.2e-28 126.7 80 72.5
CSS0010427 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 71.2
CSS0021869 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 71.2
DCAR_029091 Daucus carota HOM05D007211 ORTHO05D009060 1.8e-27 125.6 80 70.0
MD00G1109400 Malus domestica HOM05D007211 ORTHO05D009060 1.8e-27 125.6 80 70.0
Manes.10G075811 Manihot esculenta HOM05D007211 ORTHO05D009060 1.8e-27 125.6 80 73.8
Manes.10G076037 Manihot esculenta HOM05D007211 ORTHO05D009060 1.8e-27 125.6 80 73.8
Sopen01g049710 Solanum pennellii HOM05D007211 ORTHO05D009060 1.8e-27 125.6 80 71.2
ClCG05G010330 Citrullus lanatus HOM05D007211 ORTHO05D009060 2.4e-27 125.2 80 71.2
Lalb_Chr09g0319591 Lupinus albus HOM05D007211 ORTHO05D009060 2.4e-27 125.2 80 72.5
Sabra09G0072500 Salix brachista HOM05D007211 ORTHO05D009060 2.4e-27 125.2 80 72.5
Nitab4.5_0001480g0150 Nicotiana tabacum HOM05D007211 ORTHO05D009060 3.1e-27 124.8 80 71.2
TAR376G0209 Trochodendron aralioides HOM05D007211 ORTHO05D009060 3.1e-27 124.8 80 71.2
Nn1g04662 Nelumbo nucifera HOM05D007211 ORTHO05D009060 4.1e-27 124.4 80 70.0
RcHm_v2.0_Chr6g0254711 Rosa chinensis HOM05D007211 ORTHO05D009060 4.1e-27 124.4 83 68.7
CsaV3_3G018160 Cucumis sativus L. HOM05D007211 ORTHO05D009060 5.3e-27 124.0 80 70.0
Gohir.A13G044300 Gossypium hirsutum HOM05D007211 ORTHO05D009060 5.3e-27 124.0 80 70.0
HanXRQChr03g0068751 Helianthus annuus HOM05D007211 ORTHO05D009060 5.3e-27 124.0 80 71.2
MD04G1005100 Malus domestica HOM05D007211 ORTHO05D009060 5.3e-27 124.0 80 68.8
Potri.009G094200 Populus trichocarpa HOM05D007211 ORTHO05D009060 5.3e-27 124.0 80 72.5
Lsat_1_v5_gn_9_112060 Lactuca sativa HOM05D007211 ORTHO05D009060 7.0e-27 123.6 80 72.5
Thecc.02G110400 Theobroma cacao HOM05D007211 ORTHO05D009060 7.0e-27 123.6 80 70.0
Sed0014592 Sechium edule HOM05D007211 ORTHO05D009060 1.2e-26 122.9 83 65.1
Eucgr.I01095 Eucalyptus grandis HOM05D007211 ORTHO05D009060 2.0e-26 122.1 80 68.8
Gorai.013G048100 Gossypium raimondii HOM05D007211 ORTHO05D009060 2.0e-26 122.1 80 68.8
TWI79G1551 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 2.0e-26 122.1 80 67.5
Duzib248G0207 Durio zibethinus HOM05D007211 ORTHO05D009060 2.6e-26 121.7 80 68.8
FvH4_2g04840 Fragaria vesca HOM05D007211 ORTHO05D009060 2.6e-26 121.7 80 68.8
FAN15G0614 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.6e-26 121.7 80 68.8
FAN24G1282 Fragaria x ananassa HOM05D000062 ORTHO05D000043 2.6e-26 121.7 80 68.8
Gohir.D13G043400 Gossypium hirsutum HOM05D007211 ORTHO05D009060 2.6e-26 121.7 80 68.8
Aqoxy6G02839 Aquilegia oxysepala HOM05D007211 ORTHO05D009060 3.5e-26 121.3 80 66.2
COL.COLO4_32576 Corchorus olitorius HOM05D007211 ORTHO05D009060 3.5e-26 121.3 80 70.0
RcHm_v2.0_Chr6g0254661 Rosa chinensis HOM05D007211 ORTHO05D009060 3.5e-26 121.3 83 67.5
CANSAT25G1462 Cannabis sativa HOM05D007211 ORTHO05D009060 4.5e-26 120.9 80 70.0
CANSAT25G3598 Cannabis sativa HOM05D007211 ORTHO05D009060 4.5e-26 120.9 80 70.0
PGR142G3039 Punica granatum HOM05D007211 ORTHO05D009060 4.5e-26 120.9 80 67.5
Cpa.g.sc106.108 Carica papaya HOM05D007211 ORTHO05D009060 5.9e-26 120.6 80 68.8
Ciclev10029710m.g Citrus clementina HOM05D007211 ORTHO05D009060 5.9e-26 120.6 80 68.8
ECA240G2095 Erigeron canadensis HOM05D007211 ORTHO05D009060 5.9e-26 120.6 80 70.0
Atru.chr5.2471 Acer truncatum HOM05D007211 ORTHO05D009060 1.0e-25 119.8 80 67.5
MD05G1023600 Malus domestica HOM05D007211 ORTHO05D009060 1.0e-25 119.8 83 66.3
Phvul.002G053100 Phaseolus vulgaris HOM05D007211 ORTHO05D009060 1.3e-25 119.4 80 70.0
FAN27G1079 Fragaria x ananassa HOM05D007211 ORTHO05D009060 2.9e-25 118.2 80 67.5
Glyma.01G243800 Glycine max HOM05D007211 ORTHO05D009060 2.9e-25 118.2 81 69.1
TWI31G1006 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 2.9e-25 118.2 80 66.2
A05p30110 Brassica napus HOM05D002228 ORTHO05D002347 3.2e-24 114.8 80 68.8
C05p45540 Brassica napus HOM05D007211 ORTHO05D009060 3.2e-24 114.8 80 68.8
BraA05t21851Z Brassica rapa HOM05D002228 ORTHO05D002347 3.2e-24 114.8 80 68.8
Aa31LG8G6260 Aethionema arabicum HOM05D007211 ORTHO05D009060 5.5e-24 114.0 80 67.5
BcaC05g28470 Brassica carinata HOM05D007211 ORTHO05D009060 5.5e-24 114.0 80 67.5
BolC5t33279H Brassica oleracea HOM05D007211 ORTHO05D009060 5.5e-24 114.0 80 67.5
AL3G32910 Arabidopsis lyrata HOM05D007211 ORTHO05D009060 7.2e-24 113.6 80 67.5
CARHR094930 Cardamine hirsuta HOM05D007211 ORTHO05D009060 7.2e-24 113.6 80 66.2
Sp3g17560 Schrenkiella parvula HOM05D007211 ORTHO05D009060 7.2e-24 113.6 80 66.2
PSO541G5220 Papaver somniferum HOM05D007211 ORTHO05D009060 1.6e-23 112.5 81 64.2
BcaC09g48904 Brassica carinata HOM05D007211 ORTHO05D009060 2.1e-23 112.1 80 66.2
A01p35210 Brassica napus HOM05D007211 ORTHO05D009060 2.1e-23 112.1 80 66.2
BraA01t03602Z Brassica rapa HOM05D007211 ORTHO05D009060 2.1e-23 112.1 80 66.2
AT3G19508 Arabidopsis thaliana HOM05D007211 ORTHO05D009060 3.6e-23 111.3 80 65.0
BcaC09g48910 Brassica carinata HOM05D002228 ORTHO05D002347 4.7e-23 110.9 80 65.0
C01p44630 Brassica napus HOM05D007211 ORTHO05D009060 4.7e-23 110.9 80 65.0
BolC1t04431H Brassica oleracea HOM05D007211 ORTHO05D009060 4.7e-23 110.9 80 65.0
Carub.0003s1931 Capsella rubella HOM05D007211 ORTHO05D009060 4.7e-23 110.9 80 65.0
BcaB06g26010 Brassica carinata HOM05D007211 ORTHO05D009060 1.4e-22 109.4 80 65.0
CAN.G606.15 Capsicum annuum HOM05D007211 ORTHO05D009060 5.7e-21 104.0 65 73.8
Nitab4.5_0004326g0030 Nicotiana tabacum HOM05D007211 ORTHO05D009060 5.7e-21 104.0 66 71.2
Cfa004601 Carpinus fangiana HOM05D007211 ORTHO05D009060 2.2e-20 102.1 80 58.8
Os01g0342800 Oryza sativa ssp. japonica HOM05D007211 ORTHO05D009060 8.2e-20 100.1 79 65.8
MD10G1099000 Malus domestica HOM05D007211 ORTHO05D009060 1.4e-19 99.4 69 65.2
CDE07G1397 Ceratophyllum demersum HOM05D007211 ORTHO05D009060 3.5e-18 94.7 80 57.5
AagrBONN_evm.TU.Sc2ySwM_362.2090 Anthoceros agrestis HOM05D007211 ORTHO05D009060 7.7e-18 93.6 80 58.8
BcaB04g20701 Brassica carinata HOM05D002228 ORTHO05D002347 3.8e-17 91.3 89 51.7
AagrBONN_evm.TU.Sc2ySwM_362.1547 Anthoceros agrestis HOM05D007211 ORTHO05D009060 6.5e-17 90.5 80 57.5
Zm00001eb307960 Zea mays HOM05D007211 ORTHO05D009060 8.5e-17 90.1 78 59.0
BcaC09g48905 Brassica carinata HOM05D007211 ORTHO05D009060 3.2e-16 88.2 84 53.6
Sabra16G0187800 Salix brachista HOM05D007211 ORTHO05D009060 7.2e-16 87.0 56 71.4
BcaC09g48902 Brassica carinata HOM05D007211 ORTHO05D009060 2.7e-15 85.1 105 43.8
MBI16_g16358_MAGBIO Magnolia biondii HOM05D007211 ORTHO05D009060 8.0e-15 83.6 61 62.3
BcaC09g48907 Brassica carinata HOM05D007211 ORTHO05D009060 1.1e-11 73.2 55 61.8
Pp3c17_14820 Physcomitrium patens HOM05D007211 ORTHO05D009060 3.1e-11 71.6 64 51.6
CBR_g972 Chara braunii HOM05D007211 ORTHO05D009060 7.0e-11 70.5 78 41.0
AagrBONN_evm.TU.Sc2ySwM_344.3864 Anthoceros agrestis HOM05D007211 ORTHO05D009060 2.0e-10 68.9 58 58.6
Duzib248G0756 Durio zibethinus HOM05D007211 ORTHO05D009060 1.0e-06 56.6 48 56.2
MCO09G621 Micromonas commoda HOM05D007211 ORTHO05D009060 5.2e-06 54.3 60 45.0


User provided reference genes

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