Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 1.0e-73 280.0 145 100.0
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 2.1e-71 272.3 145 98.6
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.1e-64 250.0 146 91.1
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 3.6e-63 245.0 146 89.7
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 6.2e-63 244.2 146 89.0
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.3e-62 242.3 146 86.3
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.3e-62 242.3 146 86.3
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 3.1e-62 241.9 145 86.9
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 6.8e-62 240.7 146 87.0
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.5e-61 239.6 146 88.4
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.5e-61 239.6 145 87.6
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.5e-61 239.6 146 88.4
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 2.2e-60 235.7 146 86.3
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 2.2e-60 235.7 147 86.4
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.2e-60 235.7 146 86.3
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 2.9e-60 235.3 145 86.2
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 3.7e-60 235.0 147 85.0
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.9e-60 234.6 146 87.7
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.9e-60 234.6 146 87.7
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.9e-60 234.6 146 87.7
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-59 233.4 147 85.0
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-59 233.4 147 85.0
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.1e-59 233.4 146 84.2
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.4e-59 233.0 144 84.7
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.4e-59 233.0 144 84.7
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.4e-59 233.0 144 84.7
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 1.9e-59 232.6 147 83.7
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 2.4e-59 232.3 145 84.1
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 2.4e-59 232.3 147 83.7
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 2.4e-59 232.3 146 87.0
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 3.2e-59 231.9 147 83.0
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 3.2e-59 231.9 144 84.0
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 4.1e-59 231.5 146 84.9
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 5.4e-59 231.1 144 84.0
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.2e-59 230.3 146 86.3
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 9.2e-59 230.3 147 84.4
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 1.2e-58 229.9 147 81.6
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.6e-58 229.6 146 84.2
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 2.1e-58 229.2 146 84.2
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 3.5e-58 228.4 146 84.2
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 7.8e-58 227.3 147 83.0
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.0e-57 226.9 144 82.6
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 1.3e-57 226.5 146 82.9
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.7e-57 226.1 146 82.9
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.9e-57 224.9 146 82.9
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 5.1e-57 224.6 146 84.9
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 5.1e-57 224.6 147 81.6
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 6.6e-57 224.2 147 82.3
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.6e-57 224.2 147 81.6
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 6.6e-57 224.2 147 81.6
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 6.6e-57 224.2 145 82.8
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 8.6e-57 223.8 145 82.8
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 8.6e-57 223.8 147 81.6
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.5e-56 223.0 144 81.9
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.9e-56 222.6 147 81.0
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 1.9e-56 222.6 147 82.3
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 5.6e-56 221.1 147 81.0
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 7.3e-56 220.7 147 81.0
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 9.5e-56 220.3 146 80.1
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 9.5e-56 220.3 147 81.6
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 9.5e-56 220.3 147 83.0
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.6e-55 219.5 146 80.8
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.1e-55 219.2 155 78.1
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 2.1e-55 219.2 146 80.8
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.8e-55 218.8 146 80.1
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 3.6e-55 218.4 148 79.1
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.7e-55 218.0 146 80.8
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 4.7e-55 218.0 146 81.5
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 6.2e-55 217.6 146 81.5
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 8.1e-55 217.2 149 79.9
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.1e-54 216.9 146 80.1
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.1e-54 216.9 148 81.8
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 3.1e-54 215.3 145 80.7
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.0e-54 214.9 145 77.9
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 1.5e-53 213.0 146 80.1
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 5.8e-53 211.1 147 77.6
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 5.8e-53 211.1 145 79.3
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 9.9e-53 210.3 147 74.1
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.2e-52 209.1 147 76.2
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 2.9e-52 208.8 147 78.9
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 3.8e-52 208.4 147 79.6
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 8.4e-52 207.2 137 82.5
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 8.4e-52 207.2 139 79.9
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 9.2e-51 203.8 149 75.8
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 9.2e-51 203.8 150 73.3
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 9.2e-51 203.8 150 73.3
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 8.7e-49 197.2 115 89.6
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.5e-48 196.4 149 71.1
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 4.3e-48 194.9 150 74.0
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 2.1e-47 192.6 156 69.2
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 4.7e-47 191.4 152 72.4
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 6.2e-47 191.0 152 72.4
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.8e-46 189.5 150 70.0
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 3.1e-46 188.7 152 71.1
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.1e-46 188.7 146 71.9
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.1e-46 188.7 152 68.4
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.2e-46 188.0 146 71.9
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 6.9e-46 187.6 153 68.6
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 1.2e-45 186.8 153 71.2
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 1.2e-45 186.8 153 68.0
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.5e-45 186.4 146 71.2
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 2.2e-44 182.6 147 70.1
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 6.4e-44 181.0 147 69.4
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 4.2e-43 178.3 153 67.3
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.6e-42 176.4 109 86.2
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 3.0e-41 172.2 105 85.7
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 1.1e-40 170.2 145 66.9
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 1.1e-40 170.2 145 66.9
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 5.6e-40 167.9 112 82.1
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 7.3e-40 167.5 165 60.0
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.6e-39 166.4 149 61.1
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 2.8e-39 165.6 149 63.1
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 4.0e-38 161.8 150 62.7
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 5.3e-38 161.4 100 83.0
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 6.9e-38 161.0 147 63.9
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.3e-36 156.8 139 69.1
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 6.4e-36 154.5 146 63.7
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 3.5e-34 148.7 89 86.5
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 6.7e-33 144.4 134 63.4
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 8.7e-33 144.1 151 56.3
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 8.1e-31 137.5 135 60.0
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 1.2e-29 133.7 82 82.9
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 2.9e-28 129.0 140 52.1
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 8.4e-28 127.5 135 53.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.4e-27 126.7 92 72.8
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.4e-27 126.7 92 72.8
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 5.3e-22 108.2 166 46.4
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.1e-19 100.5 92 62.0
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 2.5e-19 99.4 79 60.8
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 4.2e-19 98.6 78 66.7
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 7.1e-19 97.8 79 63.3
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.0e-18 94.7 71 67.6
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.0e-18 94.7 71 67.6
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 7.9e-18 94.4 71 67.6
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.3e-17 93.6 69 63.8
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.3e-17 93.6 71 76.1
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 8.7e-17 90.9 69 66.7
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.1e-16 90.5 69 66.7
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.5e-16 90.1 69 65.2
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.9e-16 89.7 149 39.6
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 1.6e-15 86.7 143 44.1
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.5e-11 72.8 72 52.8
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 7.2e-11 71.2 72 52.8
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 6.1e-10 68.2 72 51.4
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.4e-09 67.0 125 42.4
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 8.8e-09 64.3 70 47.1
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 4.8e-07 58.5 72 43.1
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 3.1e-06 55.8 72 41.7
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 5.3e-06 55.1 51 60.8


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