Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 4.4e-286 987.3 493 100.0
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 8.2e-208 727.2 439 80.0
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.7e-205 719.5 425 82.1
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 3.8e-205 718.4 468 75.2
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 3.2e-204 715.3 426 81.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 3.2e-204 715.3 425 81.6
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.2e-203 713.4 487 72.1
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 7.9e-203 710.7 426 81.2
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 1.8e-202 709.5 487 73.7
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.8e-202 709.5 469 74.6
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 3.9e-202 708.4 458 75.1
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 2.5e-201 705.7 437 78.0
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 2.4e-199 699.1 446 76.2
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 6.9e-199 697.6 480 73.3
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.0e-198 696.0 444 74.8
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 2.6e-198 695.7 460 74.6
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.0e-197 693.7 486 71.8
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 1.7e-197 693.0 502 69.3
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.2e-197 692.6 466 72.7
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 2.9e-197 692.2 422 78.7
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 6.5e-197 691.0 447 75.4
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.1e-196 690.3 494 70.6
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 1.9e-196 689.5 461 74.8
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 3.2e-196 688.7 443 76.3
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 4.2e-196 688.3 461 73.3
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 7.2e-196 687.6 444 74.5
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.6e-195 686.4 433 76.0
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 2.7e-195 685.6 464 73.1
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 2.7e-195 685.6 496 69.8
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 1.0e-194 683.7 447 74.5
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 6.7e-194 681.0 444 73.9
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.1e-193 680.2 469 71.6
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.1e-193 680.2 459 71.9
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 1.5e-193 679.9 452 72.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 6.3e-192 674.5 528 66.1
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 4.1e-191 671.8 437 75.7
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 5.3e-191 671.4 447 72.5
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 9.1e-191 670.6 470 70.9
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 4.5e-190 668.3 434 74.9
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 7.7e-190 667.5 445 72.1
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.0e-189 667.2 431 74.7
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.3e-189 666.8 487 70.4
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.3e-189 666.8 429 75.1
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.7e-189 666.4 487 67.6
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.7e-189 666.4 421 74.3
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 2.2e-189 666.0 423 74.2
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 6.5e-189 664.5 423 74.2
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 8.5e-189 664.1 462 71.2
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 2.5e-188 662.5 423 74.0
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 2.5e-188 662.5 428 74.8
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 5.5e-188 661.4 429 73.9
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 7.2e-188 661.0 423 74.0
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 7.2e-188 661.0 438 72.4
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.6e-187 659.8 432 72.9
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 2.7e-187 659.1 423 73.8
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 3.6e-187 658.7 447 69.8
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.0e-186 657.1 420 75.5
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 8.8e-186 654.1 419 74.0
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 5.7e-185 651.4 422 74.2
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 5.7e-185 651.4 492 67.3
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 9.7e-185 650.6 425 73.2
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 8.2e-184 647.5 485 68.0
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 1.4e-183 646.7 421 74.3
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 2.7e-179 632.5 432 71.8
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 4.7e-179 631.7 482 66.6
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 2.3e-178 629.4 487 66.3
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 2.3e-178 629.4 582 58.4
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 6.7e-178 627.9 380 80.0
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 8.8e-178 627.5 385 78.2
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.3e-177 625.5 378 78.6
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 3.5e-174 615.5 437 69.6
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 5.9e-174 614.8 381 77.4
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.1e-171 606.3 382 74.9
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 2.1e-171 606.3 438 71.2
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 2.3e-170 602.8 383 74.9
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 7.5e-169 597.8 374 75.4
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 9.1e-167 590.9 489 62.4
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 6.6e-165 584.7 335 82.1
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 4.7e-163 578.6 438 67.1
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 6.1e-163 578.2 420 68.3
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 4.5e-158 562.0 427 65.1
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 7.8e-158 561.2 393 69.7
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 2.1e-155 553.1 424 65.6
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 6.8e-154 548.1 399 67.4
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 6.4e-152 541.6 418 62.4
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 1.1e-151 540.8 490 59.8
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.9e-151 540.0 347 73.5
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 1.9e-151 540.0 430 60.5
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 3.2e-143 512.7 314 77.4
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 4.7e-139 498.8 326 72.1
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.4e-135 487.3 434 58.1
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.3e-124 449.5 469 51.4
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 8.7e-117 424.9 460 47.6
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 7.6e-113 411.8 256 77.7
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 4.5e-105 386.0 246 74.0
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.3e-98 362.5 436 45.9
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 6.3e-91 339.0 315 57.5
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 2.4e-90 337.0 315 57.5
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 4.5e-89 332.8 202 77.7
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 5.3e-82 309.3 277 56.0
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 1.2e-78 298.1 222 68.9
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 7.7e-73 278.9 211 66.8
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.3e-66 256.1 179 67.6
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 4.4e-60 236.5 440 38.2
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 3.7e-59 233.4 310 46.8
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 5.5e-55 219.5 164 64.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 5.8e-36 156.4 85 90.6
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.3e-35 155.2 93 80.6
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.7e-32 144.8 105 62.9
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 3.1e-29 134.0 89 73.0
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 1.2e-17 95.5 58 74.1
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 3.4e-12 77.4 42 88.1
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.1e-06 58.2 37 70.3
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 3.6e-06 57.4 225 24.0


User provided reference genes

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