Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 4.2e-139 498.0 254 100.0
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 9.2e-38 161.4 234 45.3
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 1.4e-33 147.5 227 43.2
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 3.5e-29 132.9 227 41.0
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 5.1e-28 129.0 225 40.4
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 8.6e-28 128.3 229 41.0
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 8.6e-28 128.3 225 40.9
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 9.6e-27 124.8 208 40.4
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 1.2e-26 124.4 227 42.3
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 3.1e-25 119.8 231 38.1
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 1.2e-24 117.9 234 36.8
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 2.0e-24 117.1 236 38.6
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 1.3e-23 114.4 234 35.9
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.3e-23 114.4 262 35.9
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.8e-23 112.8 247 37.2
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 6.4e-23 112.1 236 34.7
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 8.4e-23 111.7 241 34.4
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 4.2e-22 109.4 244 33.2
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 7.1e-22 108.6 210 38.1
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 9.3e-22 108.2 225 35.1
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 2.1e-21 107.1 236 34.3
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 4.6e-21 105.9 234 37.2
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.0e-20 104.8 235 37.0
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 1.3e-20 104.4 258 35.7
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 2.3e-20 103.6 240 35.8
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 3.9e-20 102.8 251 36.3
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 8.7e-20 101.7 202 36.6
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 1.1e-19 101.3 242 35.5
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.1e-19 101.3 224 37.1
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 2.5e-19 100.1 238 32.8
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 5.6e-19 99.0 233 37.3
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 7.3e-19 98.6 257 35.0
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 1.6e-18 97.4 268 30.6
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 3.6e-18 96.3 226 33.6
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.8e-18 95.9 237 34.2
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 4.8e-18 95.9 220 33.6
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 8.1e-18 95.1 231 33.3
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 1.4e-17 94.4 229 37.1
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.4e-17 94.4 255 32.2
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 5.3e-17 92.4 245 35.1
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 9.0e-17 91.7 237 33.3
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 9.0e-17 91.7 164 39.0
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 2.0e-16 90.5 241 33.6
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.5e-16 89.4 237 32.9
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 7.6e-16 88.6 229 33.6
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 1.3e-15 87.8 238 30.7
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 2.2e-15 87.0 228 30.3
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 2.9e-15 86.7 249 32.1
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 3.8e-15 86.3 235 33.2
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 1.1e-14 84.7 236 27.5
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 4.2e-14 82.8 225 32.9
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 9.3e-14 81.6 248 29.8
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 9.3e-14 81.6 265 32.8
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 1.2e-13 81.3 223 33.2
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.2e-13 81.3 239 33.1
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.1e-13 80.5 240 32.5
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 2.1e-13 80.5 279 28.3
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 2.7e-13 80.1 287 27.9
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 3.5e-13 79.7 224 28.6
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 6.0e-13 79.0 252 31.3
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 7.9e-13 78.6 215 31.2
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 1.0e-12 78.2 263 31.2
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.8e-12 77.4 240 30.8
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 3.9e-12 76.3 245 31.0
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 3.9e-12 76.3 238 31.9
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 2.5e-11 73.6 283 27.6
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 3.3e-11 73.2 200 34.0
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 4.3e-11 72.8 233 30.0
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 7.4e-11 72.0 201 32.3
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.3e-10 71.2 236 30.1
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 4.8e-10 69.3 209 31.6
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.1e-09 68.2 203 31.0
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 1.4e-09 67.8 223 28.7
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.8e-09 67.4 292 26.7
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 3.1e-09 66.6 225 29.3
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 3.1e-09 66.6 223 28.7
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 4.0e-09 66.2 218 29.4
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 6.9e-09 65.5 225 28.0
CDE02G1861 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 1.4e-06 57.8 65 52.3
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 4.2e-06 56.2 244 24.6
arahy.Tifrunner.gnm1.ann1.T5BQ73 Arachis hypogaea HOM05D000120 ORTHO05D009410 5.5e-06 55.8 66 43.9
CDE04G2781 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 7.1e-06 55.5 65 49.2
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 7.1e-06 55.5 217 27.6


User provided reference genes

Program Settings