Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g16490 Coffea canephora HOM05D003311 ORTHO05D003707 5.5e-178 627.9 402 100.0
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 1.9e-16 91.3 147 34.7
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 1.9e-16 91.3 153 36.6
Oeu010052.1 Olea europaea HOM05D003311 ORTHO05D003707 2.4e-16 90.9 148 35.8
Oeu010053.1 Olea europaea HOM05D003311 ORTHO05D003707 2.4e-16 90.9 154 35.1
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 4.1e-16 90.1 152 35.5
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 7.0e-16 89.4 134 38.1
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 9.2e-16 89.0 143 35.7
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 1.2e-15 88.6 145 36.6
Oeu008608.1 Olea europaea HOM05D003311 ORTHO05D003707 1.6e-15 88.2 140 36.4
Rhsim11G0187900 Rhododendron simsii HOM05D003311 ORTHO05D003707 1.6e-15 88.2 144 34.7
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 2.0e-15 87.8 155 34.2
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 7.8e-15 85.9 152 32.9
Lj3g0005308 Lotus japonicus HOM05D003311 ORTHO05D003707 1.3e-14 85.1 151 36.4
Oeu008607.1 Olea europaea HOM05D003311 ORTHO05D003707 1.3e-14 85.1 143 35.0
Sed0012527 Sechium edule HOM05D003311 ORTHO05D003707 1.3e-14 85.1 153 34.6
Sc08g0003160 Simmondsia chinensis HOM05D003311 ORTHO05D003707 1.3e-14 85.1 154 32.5
Eucgr.L01869 Eucalyptus grandis HOM05D003311 ORTHO05D003707 1.7e-14 84.7 145 35.2
Dinv04967 Davidia involucrata HOM05D003311 ORTHO05D003707 2.3e-14 84.3 154 34.4
Cpa.g.sc37.189 Carica papaya HOM05D003311 ORTHO05D003707 3.0e-14 84.0 155 36.1
GSVIVG01024081001 Vitis vinifera HOM05D003311 ORTHO05D003707 3.0e-14 84.0 154 32.5
Actinidia00597 Actinidia chinensis HOM05D003311 ORTHO05D003707 3.9e-14 83.6 155 33.5
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 5.0e-14 83.2 142 33.1
Hund00043 Selenicereus undatus HOM05D003311 ORTHO05D003707 5.0e-14 83.2 149 33.6
Duzib052G0176 Durio zibethinus HOM05D003311 ORTHO05D003707 6.6e-14 82.8 197 31.5
vmacro02251 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 1.1e-13 82.0 227 30.8
CiPaw.05G077500 Carya illinoinensis HOM05D003311 ORTHO05D003707 1.9e-13 81.3 138 34.8
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 1.9e-13 81.3 143 34.3
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 2.5e-13 80.9 140 34.3
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 3.3e-13 80.5 144 34.0
CSS0038966 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 4.3e-13 80.1 149 30.2
Ciclev10028101m.g Citrus clementina HOM05D003311 ORTHO05D003707 4.3e-13 80.1 137 36.5
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 4.3e-13 80.1 154 32.5
Lj9A389T67 Lonicera japonica HOM05D003311 ORTHO05D003707 4.3e-13 80.1 144 33.3
TAR628G0207 Trochodendron aralioides HOM05D003311 ORTHO05D003707 5.6e-13 79.7 144 32.6
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 7.3e-13 79.3 139 32.4
Cfa005186 Carpinus fangiana HOM05D003311 ORTHO05D003707 1.6e-12 78.2 149 34.2
MELO3C020785.2 Cucumis melo HOM05D003311 ORTHO05D003707 1.6e-12 78.2 139 32.4
CsaV3_2G015730 Cucumis sativus L. HOM05D003311 ORTHO05D003707 1.6e-12 78.2 139 33.1
Gorai.002G193500 Gossypium raimondii HOM05D003311 ORTHO05D003707 1.6e-12 78.2 155 32.9
Gohir.D01G156000 Gossypium hirsutum HOM05D003311 ORTHO05D003707 2.1e-12 77.8 155 32.9
Peaxi162Scf00362g00962 Petunia axillaris HOM05D003311 ORTHO05D003707 2.1e-12 77.8 154 35.7
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 2.8e-12 77.4 156 32.7
ClCG02G011360 Citrullus lanatus HOM05D003311 ORTHO05D003707 2.8e-12 77.4 152 32.2
ClCG02G011540 Citrullus lanatus HOM05D003311 ORTHO05D003707 2.8e-12 77.4 152 32.2
ECA246G0279 Erigeron canadensis HOM05D003311 ORTHO05D003707 2.8e-12 77.4 231 27.7
Rhsim05G0063000 Rhododendron simsii HOM05D003311 ORTHO05D003707 3.6e-12 77.0 144 31.9
Nitab4.5_0013889g0010 Nicotiana tabacum HOM05D003311 ORTHO05D003707 4.7e-12 76.6 139 33.8
Atru.chr5.3229 Acer truncatum HOM05D003311 ORTHO05D003707 6.2e-12 76.3 234 29.9
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 6.2e-12 76.3 148 35.1
Atru.chr5.3230 Acer truncatum HOM05D003311 ORTHO05D003707 8.1e-12 75.9 151 32.5
MSTRG.16857 Avicennia marina HOM05D003311 ORTHO05D003707 8.1e-12 75.9 196 27.6
Gohir.A01G164100 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.4e-11 75.1 155 32.3
HanXRQChr10g0294871 Helianthus annuus HOM05D003311 ORTHO05D003707 1.4e-11 75.1 143 33.6
Thecc.02G066700 Theobroma cacao HOM05D003311 ORTHO05D003707 2.3e-11 74.3 149 32.9
GSVIVG01024076001 Vitis vinifera HOM05D003311 ORTHO05D003707 2.3e-11 74.3 161 32.3
arahy.Tifrunner.gnm1.ann1.6SU9IG Arachis hypogaea HOM05D003311 ORTHO05D003707 3.1e-11 73.9 138 33.3
Nitab4.5_0000956g0190 Nicotiana tabacum HOM05D003311 ORTHO05D003707 3.1e-11 73.9 138 32.6
Phvul.009G024900 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 5.2e-11 73.2 127 37.0
Duzib099G0001 Durio zibethinus HOM05D003311 ORTHO05D003707 8.9e-11 72.4 209 28.7
Eucgr.I01377 Eucalyptus grandis HOM05D003311 ORTHO05D003707 8.9e-11 72.4 143 28.7
Glyma.04G005400 Glycine max HOM05D003311 ORTHO05D003707 1.2e-10 72.0 190 31.6
Lsat_1_v5_gn_3_45680 Lactuca sativa HOM05D003311 ORTHO05D003707 1.2e-10 72.0 145 29.7
arahy.Tifrunner.gnm1.ann1.M74JA5 Arachis hypogaea HOM05D003311 ORTHO05D003707 1.5e-10 71.6 138 32.6
VMungo1309G0179 Vigna mungo HOM05D003311 ORTHO05D003707 1.5e-10 71.6 126 34.9
Hund06406 Selenicereus undatus HOM05D003396 ORTHO05D003646 2.0e-10 71.2 141 31.2
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 2.6e-10 70.9 155 31.0
PGSC0003DMG400004441 Solanum tuberosum HOM05D003311 ORTHO05D003707 2.6e-10 70.9 138 32.6
Peaxi162Scf00538g00520 Petunia axillaris HOM05D003311 ORTHO05D003707 3.4e-10 70.5 179 30.2
AUR62010091 Chenopodium quinoa HOM05D003311 ORTHO05D003707 4.4e-10 70.1 181 27.6
HanXRQChr07g0186871 Helianthus annuus HOM05D003311 ORTHO05D003707 4.4e-10 70.1 233 27.0
Manes.11G090200 Manihot esculenta HOM05D003311 ORTHO05D003707 4.4e-10 70.1 155 31.6
FAN15G0502 Fragaria x ananassa HOM05D003311 ORTHO05D003707 5.8e-10 69.7 148 33.1
CANSAT25G1598 Cannabis sativa HOM05D003311 ORTHO05D003707 7.5e-10 69.3 155 31.0
FAN20G1603 Fragaria x ananassa HOM05D003311 ORTHO05D003707 7.5e-10 69.3 148 33.1
CAN.G104.8 Capsicum annuum HOM05D003311 ORTHO05D003707 9.9e-10 68.9 138 33.3
FAN24G0785 Fragaria x ananassa HOM05D003311 ORTHO05D003707 9.9e-10 68.9 148 32.4
FAN27G1129 Fragaria x ananassa HOM05D003311 ORTHO05D003707 9.9e-10 68.9 148 33.1
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 9.9e-10 68.9 124 30.6
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 9.9e-10 68.9 144 30.6
AUR62013087 Chenopodium quinoa HOM05D003311 ORTHO05D003707 1.3e-09 68.6 220 25.9
FvH4_2g01970 Fragaria vesca HOM05D003311 ORTHO05D003707 1.3e-09 68.6 148 32.4
Psat7g138320 Pisum sativum HOM05D003311 ORTHO05D003707 1.3e-09 68.6 130 33.8
Aqoxy5G01799 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 1.7e-09 68.2 217 26.7
SalBow6G3538 Salvia bowleyana HOM05D003311 ORTHO05D003707 2.2e-09 67.8 135 32.6
Haze_02195 Corylus avellana HOM05D003311 ORTHO05D003707 2.9e-09 67.4 148 31.1
EL10Ac9g21436 Beta vulgaris HOM05D003311 ORTHO05D003707 3.7e-09 67.0 144 30.6
MD05G1116400 Malus domestica HOM05D003311 ORTHO05D003707 6.4e-09 66.2 139 32.4
DCAR_003704 Daucus carota HOM05D003311 ORTHO05D003707 1.1e-08 65.5 251 27.5
Ah.01g009150 Amaranthus hybridus HOM05D003396 ORTHO05D003646 2.4e-08 64.3 121 32.2
ATR0810G037 Amborella trichopoda HOM05D003311 ORTHO05D003707 3.2e-08 63.9 145 29.7
unitig_0.g832 Utricularia gibba HOM05D003311 ORTHO05D003707 7.1e-08 62.8 141 29.8
vmacro17380 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 1.2e-07 62.0 99 34.3
AT4G38770 Arabidopsis thaliana HOM05D003311 ORTHO05D003707 2.1e-07 61.2 143 31.5
MSTRG.20036 Avicennia marina HOM05D003311 ORTHO05D003707 2.1e-07 61.2 113 30.1
Thhalv10025123m.g Eutrema salsugineum HOM05D003311 ORTHO05D003707 3.5e-07 60.5 143 30.1
Aa31LG7G15540 Aethionema arabicum HOM05D003311 ORTHO05D003707 6.0e-07 59.7 158 30.4
Duzib248G1175 Durio zibethinus HOM05D003311 ORTHO05D003707 6.0e-07 59.7 145 32.4
ClCG00G004470 Citrullus lanatus HOM05D003311 ORTHO05D003707 7.8e-07 59.3 98 33.7
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 7.8e-07 59.3 139 28.8
C01p00120 Brassica napus HOM05D003311 ORTHO05D003707 1.7e-06 58.2 145 26.9
Sp7g37040 Schrenkiella parvula HOM05D003311 ORTHO05D003707 1.7e-06 58.2 143 30.1
SGA_v2.0_scaffold32G13229 Striga asiatica HOM05D003311 ORTHO05D003707 1.7e-06 58.2 146 27.4
Oeu046127.1 Olea europaea HOM05D003311 ORTHO05D003707 2.3e-06 57.8 105 35.2
SalBow3G2231 Salvia bowleyana HOM05D003311 ORTHO05D003707 2.3e-06 57.8 153 28.1
AL7G10640 Arabidopsis lyrata HOM05D003311 ORTHO05D003707 3.0e-06 57.4 141 29.8
BcaNung01299 Brassica carinata HOM05D003311 ORTHO05D003707 3.0e-06 57.4 145 26.9
BolC1t00017H Brassica oleracea HOM05D003311 ORTHO05D003707 3.0e-06 57.4 145 26.9
BraA01t00013Z Brassica rapa HOM05D003311 ORTHO05D003707 3.0e-06 57.4 141 28.4
MBI05_g46239_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 3.0e-06 57.4 125 30.4
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 3.0e-06 57.4 96 33.3


User provided reference genes

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