Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 0.0e+00 2527.3 1348 100.0
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 5.1e-42 177.9 244 40.2
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 5.1e-42 177.9 209 46.9
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 5.1e-42 177.9 228 42.5
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 6.6e-42 177.6 289 39.1
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 1.1e-41 176.8 209 46.9
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 1.9e-41 176.0 289 39.4
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 1.9e-41 176.0 231 41.6
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 2.5e-41 175.6 209 46.4
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 3.3e-41 175.3 310 37.1
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 1.2e-40 173.3 253 40.7
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 2.1e-40 172.6 328 36.3
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 2.1e-40 172.6 236 41.5
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 2.8e-40 172.2 273 38.8
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 3.6e-40 171.8 216 43.1
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 3.6e-40 171.8 219 42.5
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 8.1e-40 170.6 204 44.6
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 1.4e-39 169.9 237 41.4
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 1.8e-39 169.5 312 36.9
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 2.3e-39 169.1 326 38.0
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 4.0e-39 168.3 204 43.1
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 5.2e-39 167.9 223 39.9
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 6.8e-39 167.5 216 42.6
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 6.8e-39 167.5 308 37.3
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 1.2e-38 166.8 237 40.5
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 1.5e-38 166.4 238 40.8
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 2.0e-38 166.0 279 38.4
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 2.0e-38 166.0 231 40.7
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 7.5e-38 164.1 226 40.3
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 7.5e-38 164.1 220 43.6
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 9.9e-38 163.7 291 37.1
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 9.9e-38 163.7 233 39.9
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 9.9e-38 163.7 281 38.8
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 1.7e-37 162.9 233 41.2
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 2.2e-37 162.5 216 40.3
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 2.9e-37 162.2 240 40.0
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 3.7e-37 161.8 322 35.1
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 3.7e-37 161.8 267 37.8
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 6.4e-37 161.0 215 40.5
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 8.3e-37 160.6 312 34.0
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 1.4e-36 159.8 201 43.3
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 1.9e-36 159.5 217 40.6
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 1.9e-36 159.5 217 40.6
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 1.9e-36 159.5 337 34.1
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 1.9e-36 159.5 353 33.1
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 1.9e-36 159.5 204 42.2
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 2.4e-36 159.1 205 42.9
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 3.2e-36 158.7 217 40.6
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 3.2e-36 158.7 269 37.2
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 4.1e-36 158.3 217 40.1
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 4.1e-36 158.3 219 41.6
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 4.1e-36 158.3 218 41.3
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 4.1e-36 158.3 239 40.6
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 5.4e-36 157.9 422 33.4
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 7.1e-36 157.5 223 41.3
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 7.1e-36 157.5 228 40.4
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 9.2e-36 157.1 205 41.0
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 9.2e-36 157.1 217 40.6
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 1.6e-35 156.4 232 39.2
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 2.1e-35 156.0 202 43.6
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 2.1e-35 156.0 304 34.9
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 2.1e-35 156.0 209 42.6
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 2.7e-35 155.6 205 42.0
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 2.7e-35 155.6 203 41.4
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 2.7e-35 155.6 241 39.4
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 2.7e-35 155.6 611 26.8
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 3.5e-35 155.2 209 40.2
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 3.5e-35 155.2 394 30.5
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 4.6e-35 154.8 212 40.1
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 6.0e-35 154.5 229 39.7
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 1.0e-34 153.7 206 41.3
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 1.0e-34 153.7 218 39.0
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 1.3e-34 153.3 203 43.8
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 1.7e-34 152.9 286 36.0
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 1.7e-34 152.9 218 39.4
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 1.7e-34 152.9 218 39.4
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 2.3e-34 152.5 201 42.3
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 5.1e-34 151.4 203 40.9
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 6.6e-34 151.0 266 36.5
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 8.6e-34 150.6 230 37.8
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 1.1e-33 150.2 301 34.6
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 1.1e-33 150.2 322 32.6
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 1.5e-33 149.8 201 39.8
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 1.9e-33 149.4 279 34.8
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 1.9e-33 149.4 325 34.5
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 1.9e-33 149.4 411 31.6
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 2.5e-33 149.1 205 38.0
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 3.3e-33 148.7 231 39.0
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 7.3e-33 147.5 216 39.8
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 1.6e-32 146.4 315 33.3
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 2.1e-32 146.0 216 38.4
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 2.8e-32 145.6 202 39.1
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 2.8e-32 145.6 231 39.4
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 2.8e-32 145.6 247 38.5
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 6.2e-32 144.4 290 34.1
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 1.1e-31 143.7 337 32.6
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 1.1e-31 143.7 274 35.8
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 1.8e-31 142.9 318 31.1
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 2.4e-31 142.5 239 38.1
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 3.1e-31 142.1 202 37.1
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 4.0e-31 141.7 213 39.0
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 8.9e-31 140.6 226 35.8
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 3.4e-30 138.7 202 38.1
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 4.4e-30 138.3 206 41.3
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 2.9e-29 135.6 181 40.9
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 4.9e-29 134.8 211 37.9
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 1.1e-28 133.7 345 30.1
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 2.4e-28 132.5 252 35.3
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 2.4e-28 132.5 249 34.5
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 3.2e-28 132.1 295 33.2
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 1.0e-26 127.1 252 34.5
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 2.3e-26 125.9 205 38.0
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 1.9e-25 122.9 217 33.2
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 1.9e-25 122.9 204 35.3
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 4.7e-24 118.2 197 37.1
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 1.8e-23 116.3 195 36.9
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 3.8e-21 108.6 200 36.5
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.1e-20 107.1 232 33.2
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 7.8e-19 100.9 174 35.6
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 3.3e-17 95.5 142 37.3
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 3.1e-15 89.0 221 30.3
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 9.0e-15 87.4 197 32.5
COL.COLO4_23697 Corchorus olitorius HOM05D005245 ORTHO05D006388 4.5e-14 85.1 240 29.2
COL.COLO4_10076 Corchorus olitorius HOM05D005245 ORTHO05D006388 5.8e-14 84.7 244 29.9
Zm00001eb204940 Zea mays HOM05D005245 ORTHO05D006388 4.9e-13 81.6 179 35.2
Zm00001eb238770 Zea mays HOM05D005245 ORTHO05D006388 3.2e-12 79.0 179 36.3
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 2.7e-11 75.9 53 60.4
Zm00001eb238760 Zea mays HOM05D005245 ORTHO05D006388 3.9e-10 72.0 178 35.4
Sabra13G0101200 Salix brachista HOM05D005245 ORTHO05D006388 4.3e-09 68.6 84 44.0
Os06g0538200 Oryza sativa ssp. japonica HOM05D005245 ORTHO05D006388 2.1e-08 66.2 183 31.7
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 1.1e-07 63.9 196 26.0
MELO3C019743.2 Cucumis melo HOM05D005245 ORTHO05D006388 2.4e-07 62.8 114 30.7


User provided reference genes

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