Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g14140 Coffea canephora HOM05D039367 ORTHO05D044651 2.1e-123 445.7 219 100.0
Cc02_g14170 Coffea canephora HOM05D039367 ORTHO05D044651 2.1e-123 445.7 219 100.0
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 4.1e-18 95.9 159 39.0
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.7e-08 63.9 125 38.4
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.7e-08 63.9 129 34.9
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 2.3e-08 63.5 125 37.6
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 5.0e-08 62.4 126 35.7
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 6.6e-08 62.0 124 34.7
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.6e-08 61.6 139 34.5
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 8.6e-08 61.6 182 30.8
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.6e-08 61.6 125 34.4
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.6e-08 61.6 124 34.7
Sopen03g001120 Solanum pennellii HOM05D008744 ORTHO05D010647 8.6e-08 61.6 200 31.5
Solyc03g005110.3 Solanum lycopersicum HOM05D008744 ORTHO05D010647 5.6e-07 58.9 199 30.7
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.3e-07 58.5 135 33.3
A01p06820 Brassica napus HOM05D002666 ORTHO05D004769 9.5e-07 58.2 146 32.9
BraA01t00634Z Brassica rapa HOM05D002666 ORTHO05D004769 9.5e-07 58.2 146 32.9
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 9.5e-07 58.2 144 31.9
Thhalv10023855m.g Eutrema salsugineum HOM05D007210 ORTHO05D006152 1.2e-06 57.8 121 30.6
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 2.1e-06 57.0 122 33.6
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.8e-06 56.6 121 32.2
AT1G63200 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 3.6e-06 56.2 122 35.2


User provided reference genes

Program Settings