Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 3.1e-251 871.3 440 100.0
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.0e-205 719.2 440 81.1
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 2.9e-204 715.3 440 81.4
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 5.6e-200 701.0 446 78.7
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 2.8e-199 698.7 433 79.9
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 3.6e-199 698.4 443 78.3
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 9.9e-197 690.3 437 77.8
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.3e-196 689.9 438 79.0
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 2.2e-196 689.1 437 79.2
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 1.1e-192 676.8 438 76.3
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 9.6e-192 673.7 438 77.6
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.1e-190 670.2 437 77.1
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.4e-190 669.1 449 75.5
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 3.1e-190 668.7 435 76.8
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 7.6e-189 664.1 434 76.0
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 9.9e-189 663.7 438 74.7
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 1.7e-188 662.9 439 75.2
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 3.8e-188 661.8 442 75.6
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 3.8e-188 661.8 441 76.0
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 8.4e-188 660.6 431 77.0
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 3.3e-184 648.7 441 74.1
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.3e-184 648.3 438 73.1
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 5.6e-184 647.9 437 73.7
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 7.3e-184 647.5 447 74.5
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.3e-183 646.7 438 74.0
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 2.1e-183 646.0 434 75.1
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 2.1e-183 646.0 431 75.9
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 3.1e-182 642.1 431 76.3
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 4.0e-182 641.7 429 75.3
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-181 640.2 440 72.5
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 9.9e-181 637.1 436 72.7
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.7e-180 636.3 445 72.1
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.7e-180 636.3 433 75.1
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.2e-180 636.0 436 74.5
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 3.8e-180 635.2 433 74.4
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 3.8e-180 635.2 438 72.6
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 3.8e-180 635.2 447 72.7
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 8.4e-180 634.0 430 73.7
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 8.4e-180 634.0 429 74.1
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 8.4e-180 634.0 432 73.8
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.1e-179 633.6 443 72.2
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 2.4e-179 632.5 433 72.1
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 3.2e-179 632.1 435 73.1
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 3.2e-179 632.1 434 73.7
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 3.2e-179 632.1 441 71.7
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 7.1e-179 630.9 460 70.2
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 7.1e-179 630.9 429 75.1
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 9.3e-179 630.6 426 73.7
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.6e-178 629.8 438 71.0
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 2.1e-178 629.4 434 73.7
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.7e-178 629.0 436 73.9
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 3.5e-178 628.6 445 71.9
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 6.0e-178 627.9 434 73.7
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 7.9e-178 627.5 438 70.8
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.3e-177 626.7 437 70.3
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 1.8e-177 626.3 426 74.2
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 3.9e-177 625.2 435 71.0
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 5.1e-177 624.8 438 71.9
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 8.7e-177 624.0 442 71.0
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 1.3e-175 620.2 437 69.3
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 5.3e-174 614.8 442 70.1
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-173 613.6 438 68.9
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 9.9e-173 610.5 445 70.6
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.2e-172 609.4 440 70.0
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 1.4e-171 606.7 440 70.0
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.9e-171 606.3 433 69.1
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 2.5e-171 605.9 438 69.6
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.1e-171 604.4 432 69.0
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 7.1e-171 604.4 459 67.3
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.2e-170 603.6 429 71.6
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.2e-170 603.6 442 67.6
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 2.7e-170 602.4 438 68.9
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 6.0e-170 601.3 446 69.7
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 7.9e-170 600.9 430 71.6
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 2.3e-169 599.4 440 68.2
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 3.0e-169 599.0 448 69.2
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 3.9e-169 598.6 429 70.6
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 3.3e-168 595.5 438 69.4
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 7.4e-168 594.3 432 68.8
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.2e-165 587.0 430 69.1
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.2e-165 587.0 430 69.1
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.6e-165 585.9 432 69.2
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.6e-165 585.9 432 69.2
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 2.2e-164 582.8 447 68.5
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.9e-164 581.6 441 66.4
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 8.4e-164 580.9 441 68.0
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 1.4e-163 580.1 498 63.1
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.2e-163 578.9 433 66.5
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 7.1e-163 577.8 452 67.5
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 3.3e-160 568.9 444 64.6
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.3e-160 568.5 368 75.5
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 6.9e-158 561.2 440 67.0
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 1.5e-157 560.1 431 67.1
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.2e-155 552.4 444 64.2
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.0e-152 543.1 384 71.6
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 7.4e-152 541.2 346 78.0
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 1.8e-145 520.0 436 62.2
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.0e-145 519.2 362 73.2
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.5e-144 516.9 447 63.1
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 2.0e-144 516.5 342 74.6
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.7e-143 513.5 338 75.1
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 3.1e-142 509.2 434 63.1
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 1.7e-140 503.4 445 60.0
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 5.2e-137 491.9 328 74.7
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 2.5e-131 473.0 355 68.5
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 8.0e-130 468.0 607 45.8
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.4e-126 457.2 439 51.9
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 5.0e-124 448.7 432 51.9
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 4.2e-123 445.7 435 51.7
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 7.2e-123 444.9 292 77.1
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 9.8e-120 434.5 428 51.4
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 3.2e-94 349.7 451 43.2
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 6.0e-93 345.5 314 54.8
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 7.1e-86 322.0 276 63.0
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.2e-85 321.2 333 53.2
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 4.6e-85 319.3 213 72.3
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.7e-84 317.4 206 76.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.1e-45 187.6 157 58.6
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-43 180.6 205 51.7
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 7.4e-43 179.1 399 34.1
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 5.3e-33 146.4 118 61.9
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 8.5e-31 139.0 102 67.6
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.1e-25 120.6 91 68.1
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 4.0e-20 103.6 112 46.4
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 3.3e-19 100.5 67 71.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 1.7e-18 98.2 98 48.0
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.2e-10 71.2 124 38.7
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 1.1e-09 68.9 63 54.0
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 1.3e-07 62.0 39 79.5
FAN09G2993 Fragaria x ananassa HOM05D006332 ORTHO05D210550 8.5e-07 59.3 72 54.2
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 1.1e-06 58.9 40 72.5


User provided reference genes

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