Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g12640 Coffea canephora HOM05D007756 ORTHO05D009403 1.4e-27 125.6 63 100.0
Hma1.2p1_0144F.1_g064960 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 6.3e-12 73.6 57 71.9
Hma1.2p1_0144F.1_g064980 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 4.1e-11 70.9 57 70.2
Solyc02g078890.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 4.1e-11 70.9 59 69.5
Sopen02g023700 Solanum pennellii HOM05D007756 ORTHO05D009403 4.1e-11 70.9 59 69.5
PGSC0003DMG400022448 Solanum tuberosum HOM05D007756 ORTHO05D009403 3.4e-10 67.8 58 67.2
PGSC0003DMG400022450 Solanum tuberosum HOM05D007756 ORTHO05D009403 3.4e-10 67.8 46 80.4
Solyc02g078870.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 1.0e-09 66.2 46 76.1
PGSC0003DMG400022449 Solanum tuberosum HOM05D007756 ORTHO05D009403 1.7e-09 65.5 46 76.1
Manes.16G038800 Manihot esculenta HOM05D007756 ORTHO05D009403 5.0e-09 63.9 50 68.0
Gohir.D10G020400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 8.5e-09 63.2 56 60.7
CSS0020554 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 1.4e-08 62.4 57 59.6
CSS0041901 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 1.4e-08 62.4 57 59.6
Nitab4.5_0003114g0110 Nicotiana tabacum HOM05D007756 ORTHO05D009403 1.4e-08 62.4 51 64.7
Gohir.A10G019400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.9e-08 62.0 58 56.9
Hma1.2p1_0144F.1_g064970 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 1.9e-08 62.0 58 62.1
Gohir.D10G020250 Gossypium hirsutum HOM05D007756 ORTHO05D009403 3.2e-08 61.2 56 58.9
Gohir.A10G019600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 7.2e-08 60.1 50 62.0
Cfa000371 Carpinus fangiana HOM05D007756 ORTHO05D009403 1.2e-07 59.3 51 62.7
Ciclev10017421m.g Citrus clementina HOM05D007756 ORTHO05D009403 2.7e-07 58.2 59 54.2
Gohir.A05G164200 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.7e-07 58.2 53 56.6
Gorai.009G172100 Gossypium raimondii HOM05D007756 ORTHO05D009403 2.7e-07 58.2 53 56.6
Manes.17G040600 Manihot esculenta HOM05D007756 ORTHO05D009403 3.6e-07 57.8 52 63.5
Potri.011G044800 Populus trichocarpa HOM05D007756 ORTHO05D009403 3.6e-07 57.8 49 65.3
Manes.16G022400 Manihot esculenta HOM05D007756 ORTHO05D009403 4.6e-07 57.4 53 64.2
CiPaw.09G159600 Carya illinoinensis HOM05D007756 ORTHO05D009403 1.0e-06 56.2 49 63.3
VMungo0251G2707 Vigna mungo HOM05D007756 ORTHO05D009403 1.0e-06 56.2 49 67.3
Gohir.A06G123802 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.4e-06 55.8 51 56.9
Gohir.D05G167100 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.8e-06 55.5 53 54.7
Gohir.D06G128600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.3e-06 55.1 51 56.9
Phvul.002G223500 Phaseolus vulgaris HOM05D007756 ORTHO05D009403 2.3e-06 55.1 49 65.3
Ah.09g235940 Amaranthus hybridus HOM05D032808 ORTHO05D009403 3.0e-06 54.7 49 63.3
COL.COLO4_31554 Corchorus olitorius HOM05D007756 ORTHO05D009403 3.0e-06 54.7 46 65.2
CiPaw.09G159700 Carya illinoinensis HOM05D007756 ORTHO05D009403 3.9e-06 54.3 53 58.5
MELO3C007317.2 Cucumis melo HOM05D007756 ORTHO05D009403 3.9e-06 54.3 50 56.0
Potri.004G036375 Populus trichocarpa HOM05D007756 ORTHO05D009403 5.1e-06 53.9 41 68.3
Sed0004694 Sechium edule HOM05D007756 ORTHO05D009403 6.7e-06 53.5 50 56.0
Lsat_1_v5_gn_1_124861 Lactuca sativa HOM05D007756 ORTHO05D009403 8.8e-06 53.1 54 57.4


User provided reference genes

Program Settings