Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 0.0e+00 1446.8 727 100.0
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 3.5e-191 672.5 703 52.9
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 6.0e-191 671.8 732 52.5
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 9.6e-189 664.5 442 71.5
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.8e-187 660.2 692 53.3
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.0e-187 659.1 678 53.7
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 3.4e-186 656.0 726 54.0
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 7.6e-186 654.8 676 54.0
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.3e-185 654.1 441 71.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 2.2e-185 653.3 441 71.4
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 2.9e-185 652.9 451 70.3
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.2e-184 649.4 474 66.9
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 4.6e-183 645.6 701 51.2
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.0e-183 645.2 757 49.0
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 1.0e-182 644.4 702 50.9
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 3.0e-182 642.9 747 49.8
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 3.0e-182 642.9 408 73.0
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 2.5e-181 639.8 461 67.5
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.8e-180 636.3 748 48.4
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 3.7e-180 636.0 682 52.5
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 2.4e-179 633.3 596 57.4
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 3.4e-178 629.4 672 52.2
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.6e-178 628.2 466 66.5
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.9e-177 626.3 545 60.2
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 4.2e-176 622.5 430 69.3
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 4.2e-176 622.5 432 69.0
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 4.2e-176 622.5 734 49.3
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 7.1e-176 621.7 441 66.4
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.3e-174 617.5 554 58.5
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 5.1e-174 615.5 610 53.9
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 8.7e-174 614.8 720 48.8
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 2.1e-172 610.1 709 48.7
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 3.1e-171 606.3 417 67.4
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 1.5e-170 604.0 651 51.6
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 5.8e-170 602.1 455 64.6
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.3e-169 600.9 444 65.1
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 1.7e-169 600.5 451 63.9
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 6.5e-169 598.6 519 59.9
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.1e-168 597.8 464 62.3
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.5e-168 596.7 700 50.4
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 4.2e-168 595.9 415 65.3
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 5.5e-168 595.5 444 65.1
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 5.5e-168 595.5 404 67.6
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.6e-167 594.0 487 61.8
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 2.1e-167 593.6 709 48.2
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 6.1e-167 592.0 423 68.1
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.5e-165 586.6 686 48.0
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.7e-165 585.5 685 47.3
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 7.4e-165 585.1 579 55.1
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 2.2e-164 583.6 466 62.0
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.8e-163 580.5 707 47.7
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.2e-162 577.8 481 60.1
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.5e-162 577.4 435 63.4
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 1.0e-161 574.7 404 66.3
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 2.9e-161 573.2 443 63.4
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 6.5e-161 572.0 638 50.3
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 2.5e-160 570.1 504 57.5
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.2e-160 569.7 483 59.6
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 1.0e-158 564.7 535 55.0
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.1e-155 554.7 445 60.7
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 4.1e-155 552.7 447 61.5
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 4.5e-154 549.3 457 59.1
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 7.9e-151 538.5 604 49.0
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.7e-149 532.3 691 45.0
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 4.5e-146 522.7 432 59.0
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 7.4e-141 505.4 629 48.8
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 3.1e-139 500.0 455 55.8
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.5e-125 454.5 358 61.5
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 9.1e-123 445.3 450 52.7
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 3.3e-112 410.2 417 48.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 2.5e-104 384.0 287 63.1
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 4.1e-99 366.7 284 63.0
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 4.9e-92 343.2 267 64.0
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 4.3e-80 303.5 504 41.1
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 2.8e-79 300.8 278 55.8
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 3.4e-77 293.9 290 56.6
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 2.3e-73 281.2 391 41.4
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 2.4e-70 271.2 467 41.3
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 6.2e-63 246.5 275 48.7
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.7e-52 211.8 187 55.6
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 6.5e-36 156.8 133 52.6
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 1.4e-35 155.6 143 56.6
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 1.1e-30 139.4 133 54.1
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 4.5e-29 134.0 517 26.3
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 7.5e-24 116.7 77 62.3
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 7.0e-22 110.2 101 54.5
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 2.2e-20 105.1 125 49.6
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 7.5e-16 90.1 50 74.0
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 2.7e-13 81.6 81 46.9
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 4.2e-11 74.3 195 32.3
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.6e-10 72.4 57 59.6
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 2.3e-09 68.6 120 42.5
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 3.0e-09 68.2 165 29.1


User provided reference genes

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