Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.2e-174 616.3 294 100.0
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.2e-142 510.0 291 82.8
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.0e-141 506.9 294 81.6
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 3.9e-141 505.0 294 81.3
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.1e-140 503.4 294 81.0
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.3e-140 501.9 308 77.3
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 4.1e-138 495.0 294 79.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 5.3e-138 494.6 291 80.1
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.2e-137 493.4 294 78.6
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.5e-137 493.0 294 79.6
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 2.0e-137 492.7 294 76.2
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 3.4e-137 491.9 294 77.9
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 5.9e-137 491.1 291 78.4
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 1.0e-136 490.3 289 81.0
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 2.9e-136 488.8 294 76.9
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 2.9e-136 488.8 293 77.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.1e-135 486.9 291 78.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.1e-135 486.9 293 76.8
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 4.2e-135 485.0 291 76.6
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.7e-134 482.3 291 77.0
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.0e-133 480.3 294 75.2
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.4e-133 479.9 291 77.0
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 3.0e-133 478.8 291 77.3
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 3.9e-133 478.4 294 75.5
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.1e-133 478.0 294 75.9
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 5.1e-133 478.0 292 76.0
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.5e-132 476.5 291 75.6
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 2.0e-132 476.1 305 74.1
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 4.4e-132 474.9 294 73.8
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 7.4e-132 474.2 291 75.6
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.7e-132 473.8 292 75.3
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.3e-131 473.4 291 74.9
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 2.8e-131 472.2 285 76.5
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 3.7e-131 471.9 291 76.3
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 3.7e-131 471.9 291 76.3
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.7e-131 471.9 278 79.1
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.8e-131 471.5 291 76.3
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 8.2e-131 470.7 291 74.6
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.1e-130 470.3 291 75.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.1e-130 470.3 291 74.6
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.4e-130 469.2 291 73.9
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 5.3e-130 468.0 288 75.7
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.3e-130 468.0 291 74.2
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.6e-129 466.5 294 75.5
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.7e-128 463.0 292 74.0
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 2.9e-128 462.2 291 73.2
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 5.0e-128 461.5 291 74.9
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 5.0e-128 461.5 289 73.4
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 8.5e-128 460.7 291 71.8
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 1.1e-127 460.3 291 74.9
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.9e-127 459.5 289 74.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 2.5e-127 459.1 292 73.3
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 3.2e-127 458.8 291 73.9
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 4.2e-127 458.4 292 72.6
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 7.2e-127 457.6 291 74.6
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 7.2e-127 457.6 286 75.5
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 9.4e-127 457.2 295 72.5
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.2e-126 456.8 292 73.6
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.2e-126 456.8 290 74.5
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.6e-126 456.4 294 71.1
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.6e-126 456.4 291 72.9
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.1e-126 456.1 289 74.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 3.6e-126 455.3 292 72.6
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.6e-126 455.3 292 73.6
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 4.7e-126 454.9 292 73.6
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 6.1e-126 454.5 291 72.5
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.8e-125 453.0 294 70.7
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 2.3e-125 452.6 288 75.0
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 3.0e-125 452.2 294 70.7
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 4.0e-125 451.8 291 73.2
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 6.7e-125 451.1 291 73.5
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.1e-124 450.3 324 65.7
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.6e-124 449.1 294 70.1
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 3.3e-124 448.7 292 72.9
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 2.8e-123 445.7 288 71.9
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.4e-122 443.4 292 72.3
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.1e-122 441.8 289 68.2
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 4.1e-122 441.8 294 70.4
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 4.1e-122 441.8 290 70.7
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.6e-121 439.9 289 68.2
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 5.0e-120 434.9 276 73.9
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 6.5e-120 434.5 276 73.9
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 6.5e-120 434.5 276 73.9
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.5e-119 433.3 295 68.1
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 9.4e-119 430.6 288 69.1
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.0e-117 427.2 284 68.7
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.3e-117 426.0 276 71.0
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.0e-112 410.6 289 66.1
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.7e-112 409.8 253 76.3
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 9.4e-111 404.1 269 69.1
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.7e-110 402.5 275 67.3
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 5.2e-109 398.3 290 64.8
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.1e-106 390.6 292 63.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 2.7e-105 386.0 268 67.5
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 6.6e-104 381.3 246 74.0
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.1e-102 376.3 283 62.9
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.4e-101 373.6 252 67.9
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-98 364.0 220 77.7
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 9.5e-87 324.3 269 57.2
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 9.2e-82 307.8 175 79.4
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 7.8e-73 278.1 276 46.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.3e-72 276.6 266 50.8
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.1e-65 253.4 260 47.7
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.5e-65 252.7 265 46.8
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.8e-51 206.1 151 64.2
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-47 194.5 117 82.1
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 8.1e-46 188.3 260 38.8
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.7e-43 180.6 314 38.2
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 3.2e-42 176.4 105 72.4
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 2.3e-40 170.2 163 55.8
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.5e-39 167.5 194 45.4
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.0e-32 144.8 100 64.0
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.7e-32 142.1 95 66.3
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 2.2e-30 137.1 94 70.2
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.8e-30 136.7 84 79.8
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 8.2e-22 108.6 67 74.6
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 3.1e-21 106.7 66 74.2
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 7.7e-12 75.5 41 75.6
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 5.2e-08 62.8 48 66.7


User provided reference genes

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