Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 2.0e-71 272.3 135 100.0
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 1.7e-38 162.9 97 84.5
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 3.8e-38 161.8 111 76.6
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 4.1e-37 158.3 111 74.8
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 9.2e-37 157.1 96 82.3
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 2.1e-36 156.0 113 72.6
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 3.5e-36 155.2 111 71.2
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 3.5e-36 155.2 111 70.3
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 6.0e-36 154.5 113 71.7
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 6.0e-36 154.5 113 70.8
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 6.0e-36 154.5 111 73.9
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 7.8e-36 154.1 111 71.2
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 7.8e-36 154.1 111 70.3
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 7.8e-36 154.1 111 71.2
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 1.0e-35 153.7 111 71.2
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 1.0e-35 153.7 110 73.6
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 1.3e-35 153.3 111 70.3
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 2.3e-35 152.5 97 79.4
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 3.0e-35 152.1 111 71.2
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 5.1e-35 151.4 111 71.2
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 5.1e-35 151.4 98 79.6
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 5.1e-35 151.4 111 69.4
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 8.6e-35 150.6 111 70.3
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 8.6e-35 150.6 111 71.2
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 1.1e-34 150.2 111 70.3
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 1.1e-34 150.2 111 72.1
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 1.1e-34 150.2 111 70.3
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 1.5e-34 149.8 111 70.3
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.5e-34 149.1 111 70.3
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 2.5e-34 149.1 118 67.8
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 2.5e-34 149.1 113 69.0
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 2.5e-34 149.1 111 71.2
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 3.3e-34 148.7 111 70.3
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 3.3e-34 148.7 94 76.6
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 3.3e-34 148.7 111 69.4
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 4.3e-34 148.3 111 66.7
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 4.3e-34 148.3 111 71.2
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 5.6e-34 147.9 111 67.6
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 7.3e-34 147.5 111 69.4
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 7.3e-34 147.5 111 68.5
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 9.6e-34 147.1 111 68.5
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 9.6e-34 147.1 111 66.7
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 9.6e-34 147.1 111 69.4
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 9.6e-34 147.1 100 76.0
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 1.6e-33 146.4 111 68.5
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.6e-33 146.4 111 68.5
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 1.6e-33 146.4 113 67.3
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 2.8e-33 145.6 111 66.7
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 4.7e-33 144.8 111 68.5
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 4.7e-33 144.8 112 67.9
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 4.7e-33 144.8 97 75.3
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 6.2e-33 144.4 111 67.6
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 6.2e-33 144.4 111 69.4
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 8.1e-33 144.1 111 69.4
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.1e-32 143.7 94 77.7
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.4e-32 143.3 113 63.7
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 1.4e-32 143.3 113 62.8
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 1.8e-32 142.9 111 66.7
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 2.4e-32 142.5 111 66.7
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.4e-32 142.5 113 62.8
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 2.4e-32 142.5 111 68.5
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 2.4e-32 142.5 113 65.5
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 3.1e-32 142.1 110 66.4
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.1e-32 142.1 113 62.8
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 3.1e-32 142.1 112 63.4
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 4.0e-32 141.7 111 68.5
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 4.0e-32 141.7 111 66.7
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 6.9e-32 141.0 111 69.4
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 8.9e-32 140.6 111 64.9
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 8.9e-32 140.6 113 62.8
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 2.0e-31 139.4 92 77.2
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 4.4e-31 138.3 105 67.6
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 5.8e-31 137.9 102 72.5
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 1.7e-30 136.3 111 69.4
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 1.4e-29 133.3 86 75.6
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 1.4e-29 133.3 111 64.0
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 1.9e-29 132.9 111 65.8
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.9e-29 132.9 87 77.0
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 1.9e-29 132.9 111 63.1
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 5.4e-29 131.3 87 75.9
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 2.1e-28 129.4 111 64.0
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 2.7e-28 129.0 111 63.1
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 4.6e-28 128.3 111 64.0
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 4.6e-28 128.3 111 64.0
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 6.0e-28 127.9 95 68.4
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 7.8e-28 127.5 111 62.2
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 1.3e-27 126.7 111 62.2
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 1.3e-27 126.7 87 73.6
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 5.1e-27 124.8 111 61.3
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 1.5e-26 123.2 111 62.2
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 1.9e-26 122.9 111 58.6
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 2.5e-26 122.5 111 61.3
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 4.3e-26 121.7 103 65.0
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 5.6e-26 121.3 118 60.2
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 5.6e-26 121.3 111 60.4
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 5.6e-26 121.3 111 60.4
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 7.3e-26 120.9 103 64.1
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 1.6e-25 119.8 111 58.6
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 1.6e-25 119.8 111 57.7
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 2.1e-25 119.4 111 59.5
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 2.1e-25 119.4 111 59.5
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 2.1e-25 119.4 111 59.5
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 2.1e-25 119.4 111 59.5
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 2.1e-25 119.4 111 59.5
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 2.1e-25 119.4 111 60.4
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 2.8e-25 119.0 111 59.5
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 2.8e-25 119.0 111 59.5
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 3.6e-25 118.6 111 59.5
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 6.2e-25 117.9 95 65.3
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 8.1e-25 117.5 111 59.5
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 3.1e-24 115.5 111 58.6
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 3.4e-23 112.1 111 55.9
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 1.7e-22 109.8 90 66.7
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 4.9e-22 108.2 106 57.5
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 1.9e-21 106.3 106 56.6
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 3.2e-21 105.5 83 65.1
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 5.4e-21 104.8 95 60.0
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 9.3e-21 104.0 106 56.6
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.7e-19 97.4 80 63.8
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.5e-18 95.9 71 66.2
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 1.3e-17 93.6 111 47.7
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 8.1e-17 90.9 55 80.0
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 2.9e-14 82.4 98 45.9
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.9e-13 79.7 115 40.9
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 7.1e-13 77.8 110 42.7
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 2.7e-12 75.9 107 43.9
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.0e-11 72.4 116 39.7
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.1e-10 70.5 118 36.4
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 9.0e-08 60.8 98 35.7
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.0e-06 57.4 44 63.6


User provided reference genes

Program Settings