Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 0.0e+00 1342.0 676 100.0
Cc02_g10110 Coffea canephora HOM05D008239 ORTHO05D009800 2.2e-139 500.4 699 45.2
Cc02_g10120 Coffea canephora HOM05D008239 ORTHO05D009800 1.8e-117 427.6 581 44.4
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 4.0e-40 170.6 348 35.3
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 3.4e-39 167.5 225 44.4
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 4.9e-38 163.7 350 36.0
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 8.4e-38 162.9 312 36.2
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 3.5e-36 157.5 290 37.2
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 2.3e-35 154.8 213 43.2
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 4.8e-33 147.1 215 42.3
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 9.3e-29 132.9 606 25.2
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 2.5e-21 108.2 216 32.4
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 9.4e-21 106.3 202 33.2
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 4.6e-20 104.0 203 30.5
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 7.9e-20 103.2 201 32.3
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-19 102.8 147 38.8
Dinv30486 Davidia involucrata HOM05D010983 ORTHO05D009800 1.8e-19 102.1 280 30.0
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 3.0e-19 101.3 220 32.3
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-18 99.4 200 31.5
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.4e-18 97.4 241 32.4
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.7e-18 97.1 392 24.5
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 7.4e-18 96.7 317 27.8
Rhsim03G0008000 Rhododendron simsii HOM05D008239 ORTHO05D009800 6.3e-17 93.6 218 32.1
COL.COLO4_16500 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.4e-16 92.4 160 35.0
Dinv41765 Davidia involucrata HOM05D008239 ORTHO05D009800 3.1e-16 91.3 360 25.8
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 4.1e-16 90.9 188 32.4
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-13 82.4 350 26.6
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 3.2e-13 81.3 175 32.6
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-13 80.9 174 32.2
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 5.5e-13 80.5 339 25.4
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 9.4e-13 79.7 193 28.5
Dinv04007 Davidia involucrata HOM05D008239 ORTHO05D009800 3.6e-12 77.8 329 25.5
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 3.6e-12 77.8 191 28.8
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.7e-12 77.4 185 31.9
Dinv41180 Davidia involucrata HOM05D008239 ORTHO05D009800 3.0e-11 74.7 273 27.5
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 6.7e-11 73.6 305 26.2
Dinv21189 Davidia involucrata HOM05D008239 ORTHO05D009800 6.7e-11 73.6 292 27.4
Dinv42361 Davidia involucrata HOM05D008239 ORTHO05D009800 8.8e-11 73.2 143 30.1
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 1.5e-10 72.4 215 27.0
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 4.4e-10 70.9 206 28.2
COL.COLO4_04045 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.7e-09 68.9 188 26.6
CSS0028968 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 2.8e-09 68.2 143 32.2
COL.COLO4_17209 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.1e-08 66.2 210 27.6
COL.COLO4_17217 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.1e-08 66.2 203 26.6
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 9.1e-08 63.2 213 25.8
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 9.1e-08 63.2 213 25.8
Cc00_g27060 Coffea canephora HOM05D008239 ORTHO05D009800 1.6e-07 62.4 179 29.6
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.6e-07 62.4 213 25.8
AUR62013259 Chenopodium quinoa HOM05D023548 ORTHO05D009800 4.5e-07 60.8 195 25.6
AUR62020015 Chenopodium quinoa HOM05D023548 ORTHO05D009800 4.5e-07 60.8 195 25.6
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 7.7e-07 60.1 216 26.9
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.3e-06 59.3 205 27.3
CSS0022853 Camellia sinensis var. sinensis HOM05D008239 ORTHO05D009800 1.7e-06 58.9 81 35.8
Rhsim03G0097700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.7e-06 58.9 132 30.3


User provided reference genes

Program Settings