Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 1.8e-196 689.1 369 100.0
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 1.1e-140 503.8 327 82.6
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 4.6e-139 498.4 346 77.7
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 5.3e-135 485.0 327 79.5
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 5.3e-135 485.0 323 79.3
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 2.6e-134 482.6 327 80.1
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 2.9e-133 479.2 323 78.3
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 7.1e-132 474.6 327 76.5
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 3.3e-129 465.7 327 75.8
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 9.7e-129 464.2 324 75.6
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 1.6e-128 463.4 343 72.9
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 2.8e-128 462.6 345 73.6
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 4.8e-128 461.8 335 74.3
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 8.2e-128 461.1 327 75.2
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.1e-127 460.7 341 72.4
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 2.4e-127 459.5 327 74.0
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 3.1e-127 459.1 345 71.3
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 1.2e-126 457.2 327 74.9
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 1.5e-126 456.8 328 74.1
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 5.9e-126 454.9 355 69.3
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.0e-125 454.1 324 75.3
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 1.0e-125 454.1 339 71.7
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 6.5e-125 451.4 366 68.0
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 8.5e-125 451.1 358 68.2
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 1.1e-124 450.7 345 69.0
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 1.1e-124 450.7 327 73.4
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.4e-124 450.3 316 74.7
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 1.9e-124 449.9 327 73.1
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 2.5e-124 449.5 316 74.7
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.5e-124 449.5 316 74.7
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 3.2e-124 449.1 372 67.2
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 4.2e-124 448.7 327 72.2
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 4.2e-124 448.7 314 74.8
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 5.5e-124 448.4 327 72.2
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 9.4e-124 447.6 345 72.8
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.0e-121 439.9 316 73.1
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 9.7e-121 437.6 316 73.4
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-120 437.2 331 71.3
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 2.2e-120 436.4 358 67.0
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.4e-119 433.0 302 75.8
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.4e-119 433.0 316 73.4
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 2.4e-119 433.0 311 74.0
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 9.1e-119 431.0 336 69.0
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.2e-118 430.6 327 69.1
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 3.4e-118 429.1 324 72.8
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.7e-117 426.8 320 69.7
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 5.0e-117 425.2 316 71.2
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 5.0e-117 425.2 330 69.7
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 5.0e-117 425.2 419 60.4
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.5e-117 424.9 352 67.0
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 3.2e-116 422.5 324 69.8
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 3.2e-116 422.5 327 67.9
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 4.2e-116 422.2 312 70.5
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 7.2e-116 421.4 316 69.9
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.6e-115 420.2 318 68.2
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 3.6e-115 419.1 355 62.8
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 6.1e-115 418.3 317 68.1
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 5.7e-113 411.8 332 66.0
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 5.7e-113 411.8 336 66.1
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 1.3e-112 410.6 332 65.4
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 1.3e-112 410.6 338 66.0
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 1.3e-112 410.6 338 66.0
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.7e-112 410.2 327 66.4
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 8.2e-112 407.9 335 65.4
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 8.2e-112 407.9 335 65.4
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.1e-111 407.5 362 64.4
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 5.3e-111 405.2 312 67.9
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 1.2e-110 404.1 335 65.7
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 1.5e-110 403.7 336 65.5
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 8.5e-109 397.9 336 61.6
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 1.9e-108 396.7 324 63.3
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 3.2e-108 396.0 349 59.6
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-108 394.8 268 78.7
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 6.7e-106 388.3 319 66.8
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 8.8e-106 387.9 337 61.7
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.4e-103 380.6 277 71.8
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 2.6e-102 376.3 339 59.6
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 4.2e-100 369.0 334 58.7
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 4.2e-100 369.0 327 59.3
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 4.0e-98 362.5 316 60.8
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 2.8e-96 356.3 293 65.2
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 2.0e-94 350.1 427 49.2
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 5.9e-94 348.6 312 60.3
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.5e-89 334.0 335 56.7
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 2.6e-89 333.2 295 61.7
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.7e-88 330.5 346 51.4
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 1.7e-88 330.5 231 75.3
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 8.3e-88 328.2 228 75.9
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 9.1e-87 324.7 435 48.0
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.7e-80 303.9 342 54.1
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.1e-79 301.2 338 52.1
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 7.0e-79 298.5 361 52.4
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 7.3e-76 288.5 197 74.6
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 1.9e-71 273.9 221 68.3
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 7.0e-71 271.9 242 66.5
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 3.5e-70 269.6 218 63.3
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 3.7e-64 249.6 365 42.7
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.9e-63 247.3 168 75.6
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 5.4e-63 245.7 197 62.4
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 3.5e-62 243.0 168 74.4
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 1.1e-60 238.0 173 70.5
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 4.0e-58 229.6 194 62.9
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 1.3e-56 224.6 232 58.6
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 2.9e-56 223.4 354 40.7
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 1.1e-55 221.5 235 57.9
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 1.2e-54 218.0 242 51.7
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 1.7e-53 214.2 316 40.8
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.7e-53 214.2 313 43.1
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 2.1e-51 207.2 238 52.1
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 2.2e-48 197.2 224 55.8
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.5e-44 183.7 370 34.6
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 4.8e-43 179.5 127 71.7
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 2.0e-41 174.1 141 66.0
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.3e-40 171.4 365 35.9
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 1.3e-40 171.4 172 52.3
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 3.2e-39 166.8 325 36.3
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-38 164.5 194 43.8
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 5.1e-37 159.5 133 62.4
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 5.6e-36 156.0 338 32.5
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 4.9e-32 142.9 122 59.8
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.2e-31 139.8 124 65.3
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 2.7e-30 137.1 102 71.6
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.5e-30 136.7 288 36.8
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-29 134.8 81 86.4
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 5.1e-29 132.9 85 72.9
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.1e-28 131.7 359 29.2
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.9e-28 131.0 349 30.1
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 9.6e-28 128.6 105 61.0
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 3.7e-27 126.7 91 70.3
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 2.4e-26 124.0 117 63.2
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.9e-24 116.3 400 29.0
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.9e-23 114.4 107 58.9
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 6.0e-22 109.4 74 77.0
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 3.0e-21 107.1 105 52.4
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 5.7e-20 102.8 77 66.2
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.3e-19 101.7 68 80.9
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 4.8e-19 99.8 71 70.4
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.1e-18 98.6 58 79.3
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 2.1e-14 84.3 59 64.4
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 7.9e-14 82.4 59 69.5
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 3.0e-13 80.5 59 64.4
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 5.1e-13 79.7 65 56.9
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.5e-12 77.4 65 55.4
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.5e-12 77.4 59 57.6
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 2.2e-11 74.3 77 48.1
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.2e-11 74.3 43 79.1
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 5.3e-10 69.7 62 59.7
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 4.5e-09 66.6 61 50.8
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 5.0e-08 63.2 39 79.5
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 8.5e-08 62.4 35 80.0
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 1.1e-07 62.0 329 26.4
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.5e-07 60.8 60 48.3
Cre02.g095085 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 4.2e-07 60.1 179 27.4
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 6.1e-06 56.2 59 40.7
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 7.9e-06 55.8 232 23.3


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