Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 3.8e-179 631.3 311 100.0
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 2.1e-132 476.1 305 74.4
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 7.4e-130 467.6 305 73.8
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 1.6e-129 466.5 307 72.0
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.8e-129 465.7 305 73.8
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.8e-129 465.7 305 73.8
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 3.7e-129 465.3 307 72.3
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 4.0e-128 461.8 305 73.1
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 1.2e-127 460.3 305 73.4
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.5e-127 458.4 305 73.1
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 1.7e-126 456.4 307 71.0
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 2.9e-126 455.7 307 71.0
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 1.1e-125 453.8 304 73.0
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 1.9e-125 453.0 305 74.1
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 3.2e-125 452.2 307 69.7
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 5.5e-125 451.4 305 69.8
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 1.6e-124 449.9 305 70.5
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 2.1e-124 449.5 305 72.5
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 3.5e-124 448.7 306 72.2
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 3.5e-124 448.7 302 70.9
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 4.6e-124 448.4 305 72.1
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 7.9e-124 447.6 306 72.5
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 1.3e-123 446.8 307 71.0
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 1.8e-123 446.4 306 72.9
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 2.3e-123 446.0 306 70.6
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 5.1e-123 444.9 307 72.0
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 5.1e-123 444.9 305 71.1
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 6.7e-123 444.5 305 68.9
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 8.7e-123 444.1 306 71.6
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.1e-122 443.7 305 70.8
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.5e-122 443.4 305 69.5
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 1.5e-122 443.4 305 68.5
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.3e-122 442.2 306 70.9
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 7.4e-122 441.0 306 70.3
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 9.6e-122 440.7 306 70.9
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 1.3e-121 440.3 306 70.9
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 3.7e-121 438.7 307 71.3
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 6.2e-121 438.0 306 70.3
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 6.2e-121 438.0 314 68.2
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 8.2e-121 437.6 308 68.2
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 1.1e-120 437.2 305 69.8
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 1.4e-120 436.8 309 68.9
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 2.4e-120 436.0 305 69.5
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 2.4e-120 436.0 312 66.0
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 2.4e-120 436.0 308 68.2
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 2.4e-120 436.0 306 69.6
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 3.1e-120 435.6 305 69.2
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 3.1e-120 435.6 304 69.7
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 4.0e-120 435.3 304 70.1
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 4.0e-120 435.3 305 69.8
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 4.0e-120 435.3 324 65.4
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 5.3e-120 434.9 312 68.6
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 5.3e-120 434.9 306 70.3
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 6.9e-120 434.5 305 68.9
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 9.0e-120 434.1 304 69.4
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 1.2e-119 433.7 304 69.4
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 2.0e-119 433.0 312 67.9
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 2.0e-119 433.0 309 69.6
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 4.5e-119 431.8 309 67.3
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 5.8e-119 431.4 306 68.3
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 5.8e-119 431.4 306 68.0
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.0e-118 430.6 306 69.9
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 1.7e-118 429.9 306 65.7
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 2.9e-118 429.1 311 67.5
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 3.8e-118 428.7 305 68.2
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.8e-118 428.7 304 67.8
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 6.5e-118 427.9 305 68.2
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 8.4e-118 427.6 306 69.0
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.9e-117 426.4 305 67.5
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 2.5e-117 426.0 311 67.8
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 3.2e-117 425.6 306 68.0
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 4.2e-117 425.2 305 67.9
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 1.2e-116 423.7 306 68.3
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.6e-116 423.3 305 66.2
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.6e-116 423.3 306 68.3
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.6e-116 423.3 307 66.8
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.6e-116 423.3 307 66.8
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 2.7e-116 422.5 332 61.1
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.0e-115 420.6 313 65.8
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 1.0e-115 420.6 312 68.9
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 3.0e-115 419.1 348 63.5
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 5.1e-115 418.3 305 66.9
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 8.7e-115 417.5 306 68.0
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 8.7e-115 417.5 308 68.5
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 1.5e-114 416.8 305 66.6
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.6e-113 413.3 321 63.6
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 1.4e-112 410.2 305 63.9
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 1.8e-112 409.8 307 69.1
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 1.8e-112 409.8 350 60.0
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 9.0e-112 407.5 382 56.8
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 2.0e-111 406.4 277 70.8
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 2.9e-110 402.5 284 69.0
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 6.5e-110 401.4 305 64.3
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 8.5e-110 401.0 308 65.3
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 4.5e-103 378.6 309 60.2
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 5.9e-103 378.3 298 64.1
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.0e-99 367.5 240 73.3
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 2.0e-98 363.2 245 71.4
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 2.6e-98 362.8 277 66.1
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 7.4e-98 361.3 285 63.5
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 3.7e-97 359.0 305 58.4
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 5.3e-96 355.1 304 60.5
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 1.3e-94 350.5 250 68.4
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 3.2e-93 345.9 308 57.5
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 5.7e-90 335.1 241 65.1
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 2.4e-88 329.7 302 54.6
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 2.7e-84 316.2 308 53.9
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 3.7e-81 305.8 211 69.2
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 9.1e-80 301.2 217 65.4
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 4.7e-76 288.9 294 51.4
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 6.3e-73 278.5 305 49.2
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 6.6e-70 268.5 291 47.4
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 4.4e-58 229.2 148 74.3
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.7e-57 226.1 146 75.3
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 2.7e-55 219.9 290 41.0
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 7.8e-55 218.4 180 57.2
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 9.8e-50 201.4 319 40.8
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 2.5e-45 186.8 160 57.5
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 4.0e-43 179.5 191 57.6
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 5.4e-40 169.1 149 57.7
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 5.2e-35 152.5 149 52.3
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 9.6e-29 131.7 117 56.4
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.6e-28 131.0 139 51.8
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 2.6e-26 123.6 96 62.5
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.1e-19 100.1 67 71.6
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 9.9e-18 95.1 69 65.2
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 4.9e-17 92.8 64 67.2
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.5e-16 89.4 70 57.1
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 3.5e-15 86.7 58 70.7


User provided reference genes

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