Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.9e-170 602.4 301 100.0
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.1e-133 480.3 294 79.6
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 5.3e-133 478.0 300 76.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 6.9e-133 477.6 300 77.3
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.8e-132 474.6 303 75.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 9.9e-132 473.8 301 78.4
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.3e-131 473.4 306 76.8
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 6.4e-131 471.1 292 78.1
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 8.4e-131 470.7 302 76.2
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 2.4e-130 469.2 292 77.1
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.2e-130 468.4 290 76.9
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 5.5e-130 468.0 302 75.5
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 7.9e-129 464.2 292 74.7
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 7.9e-129 464.2 287 77.4
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.3e-128 462.6 290 75.9
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.3e-128 462.6 305 75.7
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.9e-128 461.8 298 74.2
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 3.9e-128 461.8 294 74.1
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 5.1e-128 461.5 293 74.4
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.1e-127 460.3 289 75.4
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.1e-127 460.3 287 75.6
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 1.5e-127 459.9 290 75.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.9e-127 459.5 302 73.5
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.5e-127 459.1 289 75.8
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 4.3e-127 458.4 289 75.1
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.3e-127 458.4 290 75.9
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.8e-126 455.7 292 74.0
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 6.2e-126 454.5 288 74.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.1e-125 453.8 288 74.7
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.4e-125 453.4 289 74.0
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.8e-125 453.0 292 72.6
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.1e-125 452.2 288 74.3
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 4.0e-125 451.8 292 72.9
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 9.0e-125 450.7 289 74.0
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.5e-124 449.9 292 72.6
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.5e-124 449.9 290 74.1
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 2.6e-124 449.1 337 67.7
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 4.5e-124 448.4 292 75.0
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.2e-123 446.0 296 72.0
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 2.9e-123 445.7 298 73.5
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 4.9e-123 444.9 274 78.1
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 4.9e-123 444.9 287 73.2
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 8.4e-123 444.1 293 71.3
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 8.4e-123 444.1 292 73.6
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 8.4e-123 444.1 300 70.3
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 5.5e-122 441.4 296 70.9
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 9.3e-122 440.7 288 73.3
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.2e-121 440.3 364 64.6
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.6e-121 439.9 296 71.3
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.7e-121 439.1 300 71.7
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 7.9e-121 437.6 289 72.3
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 7.9e-121 437.6 287 72.1
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 2.3e-120 436.0 281 74.4
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 2.3e-120 436.0 289 72.0
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.0e-120 435.6 322 66.8
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 5.1e-120 434.9 303 71.0
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.9e-119 433.0 331 64.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 1.9e-119 433.0 296 69.9
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 2.5e-119 432.6 289 71.3
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.3e-119 432.2 275 77.1
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 4.3e-119 431.8 289 72.7
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.3e-118 430.3 294 70.1
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 2.2e-118 429.5 294 69.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 3.1e-117 425.6 295 71.2
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.0e-116 422.9 287 69.3
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.6e-116 422.5 293 68.9
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.2e-115 419.5 299 68.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.2e-115 419.5 292 68.8
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.2e-115 419.5 265 77.4
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.0e-115 418.3 292 68.8
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 5.0e-115 418.3 305 69.5
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 6.5e-115 417.9 293 67.2
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.4e-114 416.8 286 69.2
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.2e-114 414.5 295 66.8
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.2e-113 413.7 294 68.0
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 2.7e-113 412.5 276 71.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 3.0e-112 409.1 291 67.4
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 3.9e-112 408.7 294 67.0
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 7.4e-111 404.4 292 67.5
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 7.4e-111 404.4 289 66.8
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 2.2e-110 402.9 294 70.1
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.7e-107 393.3 271 71.2
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 2.3e-104 382.9 267 70.4
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.4e-101 372.9 290 65.5
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.1e-101 372.1 290 64.5
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 1.2e-100 370.5 291 61.5
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.2e-100 370.5 290 62.4
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-98 364.0 282 64.9
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 6.7e-96 354.8 217 77.4
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.3e-94 350.5 264 62.9
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.3e-94 348.2 307 59.3
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 2.1e-89 333.2 293 59.7
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.0e-88 330.9 272 62.1
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.0e-87 326.6 204 76.5
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.3e-78 297.4 195 74.9
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.3e-75 286.6 253 60.5
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.9e-74 283.5 392 41.1
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 2.2e-62 243.4 146 78.1
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.2e-62 243.4 159 74.8
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.6e-60 237.3 253 51.0
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.3e-59 233.4 150 72.0
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.9e-54 216.5 142 71.8
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.8e-48 197.2 135 67.4
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.1e-44 183.7 260 42.7
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 5.1e-43 179.1 107 73.8
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 2.4e-40 170.2 108 76.9
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-39 167.5 190 49.5
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.0e-39 167.2 190 49.5
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.1e-32 144.8 89 73.0
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 2.4e-32 143.7 89 77.5
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 4.9e-30 136.0 82 76.8
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.7e-28 130.2 66 87.9
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 5.8e-23 112.5 144 45.8
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.7e-19 98.6 82 67.1
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 9.6e-18 95.1 60 76.7
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.6e-12 76.3 41 82.9
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.6e-12 76.3 60 60.0
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-11 74.7 56 62.5
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 6.2e-09 65.9 81 43.2
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.1e-08 65.1 45 66.7
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 2.2e-06 57.4 44 61.4


User provided reference genes

Program Settings