Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.4e-159 566.2 289 100.0
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 2.9e-112 409.1 293 71.7
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 1.0e-109 400.6 291 71.8
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 1.3e-107 393.7 291 70.4
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 1.8e-106 389.8 285 71.2
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 4.5e-105 385.2 295 68.1
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 9.9e-105 384.0 285 68.8
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.3e-104 383.6 291 69.1
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.2e-104 382.9 291 71.5
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 1.4e-103 380.2 291 69.1
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.9e-103 379.8 277 71.1
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 4.2e-103 378.6 293 67.2
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 7.1e-103 377.9 291 67.7
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.2e-102 377.1 291 68.4
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 1.6e-102 376.7 296 68.9
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.7e-102 375.9 293 67.9
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 4.6e-102 375.2 287 69.0
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 6.0e-102 374.8 293 68.9
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.0e-101 374.0 277 69.7
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 3.0e-101 372.5 293 68.3
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 3.0e-101 372.5 299 67.2
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 3.9e-101 372.1 291 69.4
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 5.1e-101 371.7 291 68.4
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.5e-100 370.2 293 68.6
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.9e-100 369.8 293 67.9
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 2.5e-100 369.4 291 66.3
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 4.3e-100 368.6 291 67.7
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 5.6e-100 368.2 293 66.9
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 7.4e-100 367.9 278 68.3
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 7.4e-100 367.9 291 66.0
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 9.6e-100 367.5 291 66.0
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.6e-99 366.7 291 67.0
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.6e-99 366.7 296 66.2
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 2.1e-99 366.3 291 66.7
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.1e-99 366.3 278 68.0
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 2.8e-99 365.9 291 67.4
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 3.7e-99 365.5 292 66.1
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 3.7e-99 365.5 297 64.0
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 3.7e-99 365.5 296 66.2
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 4.8e-99 365.2 292 66.4
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 8.2e-99 364.4 285 65.6
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 1.4e-98 363.6 292 66.4
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 1.8e-98 363.2 256 74.2
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 4.0e-98 362.1 224 79.5
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 9.0e-98 360.9 290 66.9
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 2.0e-97 359.8 298 64.4
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 3.4e-97 359.0 235 75.3
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 5.8e-97 358.2 271 72.7
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 3.8e-96 355.5 256 71.5
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 6.5e-96 354.8 275 69.5
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 6.5e-96 354.8 292 66.1
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 8.4e-96 354.4 291 66.0
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.1e-95 354.0 292 66.1
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 1.3e-93 347.1 301 62.1
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 1.3e-93 347.1 274 66.1
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.8e-93 346.7 295 64.4
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 3.9e-93 345.5 256 68.8
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 3.9e-93 345.5 256 68.4
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 8.7e-93 344.4 239 70.7
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 1.1e-92 344.0 274 66.1
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 1.6e-91 340.1 285 61.8
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.6e-91 340.1 295 63.1
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 2.2e-91 339.7 292 63.7
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 2.8e-91 339.3 288 62.5
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.7e-91 339.0 295 62.4
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 4.8e-91 338.6 293 63.1
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 6.3e-91 338.2 218 76.6
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 1.1e-90 337.4 264 66.7
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 3.1e-90 335.9 304 61.5
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 6.9e-90 334.7 292 62.3
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 2.0e-89 333.2 255 65.5
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 4.5e-89 332.0 293 61.4
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.0e-88 330.9 294 61.6
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 1.7e-88 330.1 271 63.1
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.2e-88 329.7 294 61.6
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 5.0e-88 328.6 259 68.0
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 6.5e-88 328.2 292 61.0
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 8.5e-88 327.8 298 61.4
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 8.5e-88 327.8 257 66.5
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 1.4e-87 327.0 257 66.1
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 1.4e-87 327.0 257 66.1
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 1.9e-87 326.6 301 61.1
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 4.2e-87 325.5 257 67.3
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 7.2e-87 324.7 256 66.4
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.5e-84 317.0 279 61.6
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 2.5e-84 316.2 273 63.0
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.8e-82 310.1 274 62.4
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 6.9e-82 308.1 250 64.0
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 2.0e-81 306.6 314 57.0
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 4.2e-79 298.9 236 66.1
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 5.5e-79 298.5 219 68.9
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 9.4e-79 297.7 289 58.8
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 6.7e-77 291.6 299 55.2
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 8.8e-77 291.2 294 59.5
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 4.8e-75 285.4 183 74.9
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.8e-74 283.5 256 62.1
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 4.1e-74 282.3 236 59.7
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 7.0e-74 281.6 331 51.1
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 2.0e-73 280.0 173 79.8
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.6e-73 279.6 253 61.7
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 6.5e-72 275.0 227 63.0
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.4e-69 267.3 226 55.3
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 2.3e-69 266.5 175 74.9
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 3.0e-69 266.2 222 55.9
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 2.9e-64 249.6 236 53.8
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 3.6e-62 242.7 234 52.6
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.2e-60 237.7 161 72.7
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 2.6e-60 236.5 232 50.4
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 1.0e-56 224.6 258 47.3
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 1.1e-55 221.1 233 50.6
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.0e-53 214.5 256 46.9
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.4e-50 204.1 177 55.4
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.1e-50 203.0 138 71.0
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 2.7e-49 199.9 234 51.7
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.8e-45 187.2 112 83.0
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 4.9e-43 179.1 172 58.1
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.4e-42 177.6 174 57.5
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 1.0e-37 161.4 130 64.6
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 3.2e-34 149.8 223 40.4
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 9.5e-31 138.3 131 53.4
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 2.0e-28 130.6 74 83.8
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 2.6e-28 130.2 138 51.4
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.4e-26 124.4 192 39.6
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 6.0e-25 119.0 87 64.4
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 1.0e-24 118.2 81 66.7
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 5.1e-24 115.9 87 63.2
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 9.5e-23 111.7 82 65.9
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 9.2e-18 95.1 197 33.0
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 2.7e-17 93.6 167 33.5
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 6.2e-14 82.4 80 55.0
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 5.2e-13 79.3 52 76.9
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 3.4e-12 76.6 110 48.2
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 5.8e-12 75.9 55 69.1
MCO09G447 Micromonas commoda HOM05D005617 ORTHO05D006847 9.9e-12 75.1 228 30.7
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 4.9e-11 72.8 110 46.4
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 6.4e-11 72.4 110 45.5
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 6.4e-11 72.4 110 45.5
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 6.4e-11 72.4 68 58.8
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.4e-10 71.2 110 44.5
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.9e-10 70.9 110 45.5
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 7.1e-10 68.9 60 60.0
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 4.6e-09 66.2 188 30.3


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