Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 1.3e-92 344.4 171 100.0
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 5.5e-51 206.1 165 61.2
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 1.2e-48 198.4 170 59.4
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 6.3e-47 192.6 172 58.7
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.4e-46 190.7 171 57.9
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.0e-44 185.3 175 55.4
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 1.0e-44 185.3 175 55.4
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.7e-44 184.5 169 56.2
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 3.2e-43 180.3 174 54.6
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.2e-43 180.3 168 54.8
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 1.0e-41 175.3 166 56.6
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.4e-41 174.9 171 53.2
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.4e-41 174.9 171 53.2
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.0e-41 173.7 171 52.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 4.4e-40 169.9 170 52.4
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 5.7e-40 169.5 149 56.4
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 9.8e-40 168.7 166 53.6
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 1.4e-38 164.9 163 52.1
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 1.4e-38 164.9 165 51.5
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 5.4e-38 162.9 169 49.1
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 7.0e-38 162.5 183 51.4
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.2e-37 161.8 176 51.1
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 3.5e-37 160.2 168 49.4
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 7.7e-37 159.1 169 52.1
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 3.8e-36 156.8 170 50.0
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 5.0e-36 156.4 162 50.6
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 8.6e-36 155.6 128 60.2
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 4.2e-35 153.3 98 70.4
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.6e-34 151.4 177 51.4
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 1.6e-34 151.4 179 46.4
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 8.0e-34 149.1 167 49.7
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 1.0e-33 148.7 167 48.5
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.0e-33 148.7 173 46.8
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 2.3e-33 147.5 167 48.5
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.0e-33 146.7 168 48.2
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.0e-33 146.7 168 48.2
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 4.0e-33 146.7 167 47.3
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 5.2e-33 146.4 168 48.2
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 8.9e-33 145.6 171 48.0
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 1.2e-32 145.2 174 48.3
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 1.5e-32 144.8 160 52.5
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 2.0e-32 144.4 171 46.8
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.4e-32 143.3 168 47.0
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 7.5e-32 142.5 125 54.4
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 7.5e-32 142.5 175 47.4
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 1.3e-31 141.7 96 67.7
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 1.3e-31 141.7 173 48.6
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 1.7e-31 141.4 172 48.3
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 2.2e-31 141.0 171 46.8
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 6.3e-31 139.4 172 45.3
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.4e-30 138.3 172 45.3
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 3.2e-30 137.1 153 49.0
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.2e-30 137.1 168 48.2
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 7.0e-30 136.0 148 50.0
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 9.2e-30 135.6 125 53.6
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 9.2e-30 135.6 167 46.1
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 9.2e-30 135.6 167 46.1
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 1.6e-29 134.8 177 42.4
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.0e-28 132.1 167 44.9
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 3.9e-28 130.2 130 53.1
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 5.0e-28 129.8 173 42.2
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 7.3e-27 125.9 167 44.3
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 1.2e-26 125.2 218 37.2
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 8.0e-26 122.5 174 41.4
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 2.6e-24 117.5 100 61.0
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 5.8e-24 116.3 174 39.1
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.7e-23 114.8 78 70.5
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 2.2e-23 114.4 174 40.8
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 2.2e-23 114.4 175 41.1
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.9e-23 114.0 171 40.4
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 6.4e-23 112.8 135 44.4
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 6.4e-23 112.8 135 44.4
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 8.3e-23 112.5 175 39.4
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 4.1e-22 110.2 133 45.9
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 5.4e-22 109.8 172 40.7
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 2.0e-21 107.8 178 39.9
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 4.6e-21 106.7 76 64.5
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 3.0e-20 104.0 179 36.3
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 6.6e-20 102.8 72 65.3
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 2.5e-19 100.9 130 40.8
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 9.5e-19 99.0 73 61.6
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 2.8e-18 97.4 140 40.7
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 6.2e-18 96.3 139 39.6
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 4.0e-17 93.6 185 34.1
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 4.0e-17 93.6 130 42.3
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 8.9e-17 92.4 129 40.3
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 8.9e-17 92.4 189 33.9
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 2.6e-16 90.9 189 32.8
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 1.3e-15 88.6 115 40.9
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 8.3e-15 85.9 130 41.5
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 6.0e-13 79.7 69 58.0
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 1.5e-11 75.1 76 51.3
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.6e-10 71.6 142 32.4
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 8.1e-10 69.3 43 67.4
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 2.3e-09 67.8 43 69.8
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 2.3e-09 67.8 43 67.4
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.2e-08 65.5 86 43.0
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 3.4e-08 63.9 44 59.1
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.4e-08 63.5 81 44.4
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.4e-08 63.5 81 44.4
Oeu041026.1 Olea europaea HOM05D007212 ORTHO05D009094 1.1e-06 58.9 102 31.4
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 1.9e-06 58.2 110 33.6
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 5.4e-06 56.6 81 42.0
PSO339G3988 Papaver somniferum HOM05D007212 ORTHO05D009094 9.2e-06 55.8 103 32.0


User provided reference genes

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