Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 0.0e+00 1349.0 666 100.0
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 5.4e-247 857.8 668 65.0
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 1.1e-244 850.1 667 65.1
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 2.4e-242 842.4 667 64.6
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 1.9e-239 832.8 663 65.5
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 5.4e-239 831.2 663 65.2
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 1.0e-237 827.0 666 62.6
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 3.0e-237 825.5 666 62.6
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 3.3e-236 822.0 663 63.0
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 5.6e-236 821.2 666 62.8
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 3.6e-235 818.5 670 61.6
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 3.6e-235 818.5 669 61.6
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 1.4e-234 816.6 688 62.6
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 3.1e-234 815.5 654 62.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 4.0e-234 815.1 658 63.5
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 1.2e-233 813.5 671 61.4
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 1.2e-233 813.5 671 62.4
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 3.4e-233 812.0 665 61.2
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 4.5e-233 811.6 668 61.4
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 4.5e-233 811.6 665 61.1
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 5.8e-233 811.2 667 61.5
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 5.8e-233 811.2 665 62.7
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 5.8e-233 811.2 666 61.1
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 9.9e-233 810.4 669 61.3
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 5.4e-231 804.7 665 60.6
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 1.2e-230 803.5 665 61.8
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 1.6e-230 803.1 672 61.2
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 1.3e-229 800.0 666 61.1
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.3e-229 800.0 668 60.3
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 8.7e-229 797.3 665 60.6
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 1.5e-228 796.6 658 62.0
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 7.4e-228 794.3 665 61.5
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 4.8e-227 791.6 659 60.5
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 4.8e-227 791.6 662 60.4
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 1.4e-226 790.0 667 59.5
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 1.4e-226 790.0 663 60.3
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.8e-226 789.6 664 60.4
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.3e-226 788.1 665 60.0
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 3.8e-224 781.9 671 61.1
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 1.5e-220 770.0 674 59.6
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 4.3e-220 768.5 715 56.2
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 5.6e-220 768.1 671 59.5
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 9.6e-220 767.3 671 58.9
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 9.6e-220 767.3 666 58.6
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 4.8e-219 765.0 596 65.1
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 1.1e-218 763.8 675 58.7
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 3.1e-218 762.3 666 59.2
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 5.8e-217 758.1 730 55.1
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 1.0e-216 757.3 661 59.5
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 2.2e-216 756.1 662 59.4
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 4.9e-216 755.0 666 61.1
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 3.2e-215 752.3 669 57.2
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.2e-214 750.4 670 58.1
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 2.7e-214 749.2 664 58.9
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 7.9e-214 747.7 667 56.7
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 7.9e-214 747.7 660 59.4
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 7.9e-214 747.7 666 59.0
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 1.3e-213 746.9 661 58.7
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 2.3e-213 746.1 665 58.0
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 5.7e-212 741.5 632 60.9
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 1.6e-211 740.0 661 57.9
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 3.7e-211 738.8 661 57.8
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 3.7e-211 738.8 671 57.7
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 4.8e-211 738.4 669 57.1
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 8.2e-211 737.6 657 57.4
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 8.2e-211 737.6 659 57.5
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 1.4e-210 736.9 657 57.2
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 1.4e-210 736.9 671 56.8
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 2.4e-210 736.1 661 58.4
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 2.4e-210 736.1 667 57.4
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 4.1e-210 735.3 666 57.5
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 5.3e-210 734.9 670 58.4
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 6.9e-210 734.6 697 56.1
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 9.0e-210 734.2 658 57.9
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 9.0e-210 734.2 670 58.5
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 2.6e-209 732.6 670 56.9
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 3.4e-209 732.3 668 56.4
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 1.0e-208 730.7 657 58.0
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 5.0e-208 728.4 657 57.4
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 8.5e-208 727.6 661 57.3
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 1.4e-207 726.9 659 56.8
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 1.9e-207 726.5 585 62.6
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 4.2e-207 725.3 603 61.7
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 7.2e-207 724.5 657 56.8
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 3.6e-206 722.2 662 57.7
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.3e-205 720.3 665 56.8
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 6.7e-205 718.0 670 55.8
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 1.9e-204 716.5 659 56.8
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 1.9e-204 716.5 659 56.8
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 1.9e-204 716.5 666 58.1
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 1.8e-202 709.9 625 60.8
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 3.1e-202 709.1 660 56.1
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 1.2e-201 707.2 663 56.7
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 2.6e-196 689.5 529 66.4
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 4.1e-194 682.2 668 55.4
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 2.9e-184 649.4 677 51.6
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 6.5e-184 648.3 668 52.1
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 4.2e-183 645.6 657 52.4
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.1e-182 643.3 493 68.0
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.7e-182 642.9 655 52.2
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.8e-178 630.2 672 52.2
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 1.2e-172 610.9 920 41.0
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 4.1e-170 602.4 657 52.2
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 3.2e-167 592.8 639 51.3
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 8.8e-165 584.7 633 51.3
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 3.7e-163 579.3 667 48.6
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 2.3e-160 570.1 555 53.2
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 2.2e-155 553.5 661 46.0
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.5e-151 540.8 543 53.6
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.8e-142 510.0 663 45.7
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.8e-141 507.3 523 51.2
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 4.7e-126 456.1 639 42.1
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 1.2e-124 451.4 710 40.8
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 4.3e-119 433.0 504 47.8
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 2.1e-118 430.6 554 44.6
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 9.6e-111 405.2 472 50.0
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.2e-108 398.3 401 52.1
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 4.5e-92 343.2 343 55.4
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 4.3e-87 326.6 315 54.0
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.0e-64 252.3 375 41.6
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 1.7e-62 245.0 522 32.2
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 2.4e-53 214.5 640 29.1
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 2.4e-53 214.5 531 31.1
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.6e-51 206.5 229 48.5
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.6e-51 206.5 229 48.5
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-46 192.2 146 65.1
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 1.2e-41 175.6 186 45.2
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 2.8e-41 174.5 157 55.4
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 1.7e-30 138.7 87 80.5
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 1.2e-25 122.5 413 28.8
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 2.1e-20 105.1 100 48.0
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 2.8e-17 94.7 198 36.4
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 8.9e-16 89.7 64 65.6
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.7e-12 78.2 77 50.6
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.4e-08 65.1 66 48.5
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 1.5e-07 62.4 66 47.0
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 5.8e-07 60.5 65 44.6
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 8.4e-06 56.6 68 45.6


User provided reference genes

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