Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 4.1e-73 278.1 154 100.0
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 3.4e-51 205.3 154 74.0
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 4.4e-51 204.9 141 78.7
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.2e-50 202.6 154 72.1
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 6.4e-50 201.1 154 72.7
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 3.2e-49 198.7 156 69.9
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 2.0e-48 196.1 154 70.8
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.7e-48 195.7 154 71.4
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 4.6e-48 194.9 151 72.2
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 7.8e-48 194.1 148 72.3
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 7.8e-48 194.1 152 69.7
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 5.0e-47 191.4 154 67.5
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 5.0e-47 191.4 140 72.1
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 6.6e-47 191.0 141 73.0
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 8.6e-47 190.7 140 72.1
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.1e-46 190.3 164 65.9
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 2.5e-46 189.1 154 64.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 3.3e-46 188.7 154 66.9
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 3.3e-46 188.7 145 71.0
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 4.3e-46 188.3 161 65.2
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 5.6e-46 188.0 135 71.9
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 2.1e-45 186.0 140 71.4
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.1e-45 186.0 152 65.8
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.8e-45 185.7 141 70.9
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.8e-45 185.7 155 67.7
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 2.8e-45 185.7 155 67.7
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 3.6e-45 185.3 147 66.0
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 4.7e-45 184.9 151 69.5
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 6.2e-45 184.5 142 69.0
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 6.2e-45 184.5 156 64.1
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 6.2e-45 184.5 144 70.8
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.8e-44 183.0 145 69.0
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.3e-44 182.6 154 66.2
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 6.8e-44 181.0 140 67.9
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 6.8e-44 181.0 142 67.6
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 8.9e-44 180.6 137 69.3
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.2e-43 180.3 142 66.9
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 2.0e-43 179.5 147 67.3
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.0e-43 179.5 142 67.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.0e-43 179.5 142 67.6
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 2.0e-43 179.5 142 66.9
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 2.6e-43 179.1 165 60.6
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 2.6e-43 179.1 142 66.2
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 3.4e-43 178.7 157 63.1
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.4e-43 178.7 141 68.8
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.4e-43 178.7 144 68.1
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.4e-43 178.3 142 66.9
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 7.5e-43 177.6 123 76.4
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 9.8e-43 177.2 142 66.9
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.3e-42 176.8 141 68.1
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.3e-42 176.8 128 73.4
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.3e-42 176.8 144 65.3
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.2e-42 176.0 147 66.7
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 3.7e-42 175.3 144 66.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 6.4e-42 174.5 138 68.8
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 8.3e-42 174.1 142 63.4
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 8.3e-42 174.1 135 68.9
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 2.4e-41 172.6 143 65.0
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 7.1e-41 171.0 128 70.3
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 9.2e-41 170.6 154 64.3
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 9.2e-41 170.6 121 75.2
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.2e-40 170.2 144 64.6
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.6e-40 169.9 144 62.5
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.6e-40 169.9 131 68.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 3.5e-40 168.7 152 64.5
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 4.6e-40 168.3 128 69.5
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 4.6e-40 168.3 154 59.7
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 6.0e-40 167.9 125 68.8
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 6.0e-40 167.9 144 61.8
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 6.0e-40 167.9 144 61.8
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.3e-39 166.8 137 65.0
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 2.3e-39 166.0 123 74.0
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 3.9e-39 165.2 131 67.2
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 6.6e-39 164.5 113 74.3
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 6.6e-39 164.5 109 76.1
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 6.6e-39 164.5 172 56.4
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.5e-38 163.3 133 64.7
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.6e-37 159.8 151 55.0
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.1e-37 159.5 134 62.7
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 2.8e-37 159.1 151 55.6
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 3.6e-37 158.7 144 61.1
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 3.6e-37 158.7 144 61.1
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.6e-37 158.7 166 54.8
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.6e-37 158.7 150 60.0
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 8.1e-37 157.5 151 57.0
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.1e-36 157.1 134 64.9
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.8e-36 156.4 128 66.4
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.8e-36 156.4 152 57.9
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.3e-36 156.0 151 58.9
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.3e-36 156.0 151 58.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.3e-36 156.0 151 58.9
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 3.1e-36 155.6 152 57.9
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 4.0e-36 155.2 151 58.9
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.0e-36 155.2 137 62.8
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 4.0e-36 155.2 129 62.8
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 5.2e-36 154.8 128 65.6
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 5.2e-36 154.8 151 58.3
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 5.2e-36 154.8 147 57.8
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 6.8e-36 154.5 217 47.9
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 8.9e-36 154.1 145 60.7
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 3.4e-35 152.1 134 62.7
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.4e-35 151.8 175 50.9
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 5.8e-35 151.4 131 62.6
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.3e-34 150.2 133 61.7
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 3.7e-34 148.7 141 61.0
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.4e-34 147.9 154 55.2
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 7.1e-33 144.4 158 53.8
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 6.0e-32 141.4 146 56.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 7.8e-32 141.0 152 53.9
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.0e-31 139.0 151 55.0
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 8.6e-31 137.5 131 58.8
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.5e-30 136.7 113 66.4
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 5.2e-28 128.3 311 33.4
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 5.2e-28 128.3 107 63.6
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.6e-27 125.9 153 51.6
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 4.2e-25 118.6 106 60.4
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.8e-20 103.2 103 58.3
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.5e-19 100.1 70 71.4
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.3e-18 97.1 76 67.1
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.4e-17 93.6 137 46.0
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.9e-17 93.2 137 46.0
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 3.5e-16 89.0 128 42.2
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.7e-15 86.7 145 46.2
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 3.3e-14 82.4 78 59.0
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.2e-09 65.9 65 55.4
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.0e-07 59.3 62 58.1


User provided reference genes

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