Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g08260 Coffea canephora HOM05D012249 ORTHO05D014194 1.1e-138 496.5 232 100.0
SalBow3G2935 Salvia bowleyana HOM05D012249 ORTHO05D014194 5.9e-15 85.5 212 33.5
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 7.7e-15 85.1 230 30.9
Migut.F00864 Erythranthe guttata HOM05D012249 ORTHO05D014194 2.2e-14 83.6 217 32.3
Oeu037519.1 Olea europaea HOM05D012249 ORTHO05D014194 3.8e-14 82.8 223 33.6
SalBow5G4205 Salvia bowleyana HOM05D012249 ORTHO05D014194 1.4e-13 80.9 182 34.1
Actinidia21095 Actinidia chinensis HOM05D030391 ORTHO05D010368 1.2e-12 77.8 155 34.2
Solyc06g084340.1 Solanum lycopersicum HOM05D015379 ORTHO05D017769 5.1e-11 72.4 158 31.6
SGA_v2.0_scaffold71G23917 Striga asiatica HOM05D012249 ORTHO05D014194 2.0e-10 70.5 174 30.5
Oeu001437.1 Olea europaea HOM05D012249 ORTHO05D014194 3.7e-09 66.2 248 29.0
CsaV3_7G028570 Cucumis sativus L. HOM05D029525 ORTHO05D010368 1.1e-08 64.7 58 55.2
ClCG09G006850 Citrullus lanatus HOM05D029525 ORTHO05D010368 1.4e-08 64.3 66 50.0
QL12p022735 Quercus lobata HOM05D010143 ORTHO05D010368 4.1e-08 62.8 66 39.4
Sed0006744 Sechium edule HOM05D029525 ORTHO05D010368 1.2e-07 61.2 74 45.9
Rhsim13G0022300 Rhododendron simsii HOM05D000563 ORTHO05D000536 2.0e-07 60.5 149 29.5
SalBow5G4839 Salvia bowleyana HOM05D012249 ORTHO05D014194 2.6e-07 60.1 134 35.1
Duzib128G1162 Durio zibethinus HOM05D000520 ORTHO05D000399 1.3e-06 57.8 73 39.7
CARHR079170 Cardamine hirsuta HOM05D010143 ORTHO05D010368 1.7e-06 57.4 89 31.5
Haze_04748 Corylus avellana HOM05D027832 ORTHO05D010368 1.7e-06 57.4 51 51.0
Haze_04751 Corylus avellana HOM05D027832 ORTHO05D010368 1.7e-06 57.4 63 49.2
Oeu011172.1 Olea europaea HOM05D000563 ORTHO05D006573 2.2e-06 57.0 204 30.9
Potri.009G126600 Populus trichocarpa HOM05D014780 ORTHO05D010368 2.9e-06 56.6 82 32.9
COL.COLO4_13507 Corchorus olitorius HOM05D000416 ORTHO05D000322 5.0e-06 55.8 74 40.5
Lj1g0011037 Lotus japonicus HOM05D000520 ORTHO05D000399 6.5e-06 55.5 73 45.2
CANSAT54G1951 Cannabis sativa HOM05D000520 ORTHO05D000399 8.5e-06 55.1 67 38.8
Cc04_g13830 Coffea canephora HOM05D010143 ORTHO05D010368 8.5e-06 55.1 66 39.4


User provided reference genes

Program Settings