Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g06900 Coffea canephora HOM05D003476 ORTHO05D004057 1.6e-68 262.7 136 100.0
Lsat_1_v5_gn_5_2880 Lactuca sativa HOM05D003476 ORTHO05D004057 4.0e-32 141.7 91 74.7
Lj1A950T61 Lonicera japonica HOM05D003476 ORTHO05D004057 4.0e-32 141.7 96 75.0
CSS0000698 Camellia sinensis var. sinensis HOM05D003476 ORTHO05D004057 3.4e-31 138.7 100 73.0
Actinidia13919 Actinidia chinensis HOM05D003476 ORTHO05D004057 7.6e-31 137.5 80 78.8
SalBow6G1938 Salvia bowleyana HOM05D003476 ORTHO05D004057 7.6e-31 137.5 80 81.2
Oeu039001.1 Olea europaea HOM05D003476 ORTHO05D004057 1.3e-30 136.7 95 73.7
Migut.F01426 Erythranthe guttata HOM05D003476 ORTHO05D004057 1.7e-30 136.3 99 73.7
HanXRQChr12g0370541 Helianthus annuus HOM05D003476 ORTHO05D004057 3.8e-30 135.2 89 73.0
unitig_747.g21420 Utricularia gibba HOM05D003476 ORTHO05D004057 6.5e-30 134.4 82 80.5
GSVIVG01016365001 Vitis vinifera HOM05D003476 ORTHO05D004057 6.5e-30 134.4 86 75.6
Ciclev10032786m.g Citrus clementina HOM05D003476 ORTHO05D004057 8.4e-30 134.0 96 68.8
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 8.4e-30 134.0 94 73.4
Oeu039509.1 Olea europaea HOM05D003476 ORTHO05D004057 1.1e-29 133.7 95 71.6
CANSAT56G1382 Cannabis sativa HOM05D003476 ORTHO05D004057 1.9e-29 132.9 100 69.0
MBI16_g26377_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.9e-29 132.9 107 65.4
MSTRG.8311 Avicennia marina HOM05D003476 ORTHO05D004057 2.5e-29 132.5 94 71.3
Prupe.2G246300 Prunus persica HOM05D003476 ORTHO05D004057 2.5e-29 132.5 82 75.6
PGR142G4151 Punica granatum HOM05D003476 ORTHO05D004057 2.5e-29 132.5 94 70.2
TWI09G0086 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.5e-29 132.5 80 81.2
TWI23G0971 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.5e-29 132.5 80 81.2
CiPaw.02G189900 Carya illinoinensis HOM05D003476 ORTHO05D004057 3.2e-29 132.1 94 73.4
ClCG07G004000 Citrullus lanatus HOM05D003476 ORTHO05D004057 3.2e-29 132.1 78 76.9
ClCG07G004010 Citrullus lanatus HOM05D003476 ORTHO05D004057 3.2e-29 132.1 78 76.9
Medtr5g081900 Medicago truncatula HOM05D003476 ORTHO05D004057 3.2e-29 132.1 83 71.1
FAN06G4561 Fragaria x ananassa HOM05D003476 ORTHO05D004057 4.2e-29 131.7 79 75.9
Atru.chr12.241 Acer truncatum HOM05D003476 ORTHO05D004057 5.5e-29 131.3 76 80.3
RcHm_v2.0_Chr1g0369421 Rosa chinensis HOM05D003476 ORTHO05D004057 5.5e-29 131.3 83 73.5
DCAR_011789 Daucus carota HOM05D003476 ORTHO05D004057 9.3e-29 130.6 97 69.1
VMungo0647G2503 Vigna mungo HOM05D003476 ORTHO05D004057 9.3e-29 130.6 100 60.0
Nitab4.5_0003770g0040 Nicotiana tabacum HOM05D003476 ORTHO05D004057 1.2e-28 130.2 91 71.4
Sed0008497 Sechium edule HOM05D003476 ORTHO05D004057 1.2e-28 130.2 79 75.9
TAR633G0614 Trochodendron aralioides HOM05D003476 ORTHO05D004057 1.2e-28 130.2 96 70.8
Thecc.10G026100 Theobroma cacao HOM05D003476 ORTHO05D004057 1.6e-28 129.8 94 70.2
FAN03G0251 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.1e-28 129.4 93 65.6
HanXRQChr08g0222281 Helianthus annuus HOM05D003476 ORTHO05D004057 2.7e-28 129.0 89 70.8
ECA238G4332 Erigeron canadensis HOM05D003476 ORTHO05D004057 3.5e-28 128.6 96 70.8
Glyma.02G254500 Glycine max HOM05D003476 ORTHO05D004057 3.5e-28 128.6 78 74.4
Rhsim13G0104300 Rhododendron simsii HOM05D003476 ORTHO05D004057 3.5e-28 128.6 120 59.2
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea HOM05D003476 ORTHO05D004057 4.6e-28 128.3 80 72.5
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea HOM05D003476 ORTHO05D004057 4.6e-28 128.3 80 72.5
Potri.010G192700 Populus trichocarpa HOM05D003476 ORTHO05D004057 4.6e-28 128.3 104 66.3
TPR.G8041 Trifolium pratense HOM05D003476 ORTHO05D004057 4.6e-28 128.3 73 79.5
Sed0009203 Sechium edule HOM05D003476 ORTHO05D004057 6.0e-28 127.9 105 62.9
SGA_v2.0_scaffold76G25080 Striga asiatica HOM05D003476 ORTHO05D004057 6.0e-28 127.9 90 71.1
Sopen04g028030 Solanum pennellii HOM05D003476 ORTHO05D004057 7.9e-28 127.5 86 75.6
TWI53G1335 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 7.9e-28 127.5 80 76.2
vmacro10062 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 7.9e-28 127.5 119 58.0
FvH4_7g24030 Fragaria vesca HOM05D003476 ORTHO05D004057 1.3e-27 126.7 77 75.3
FAN01G1497 Fragaria x ananassa HOM05D003476 ORTHO05D004057 1.3e-27 126.7 77 75.3
Nn5g27487 Nelumbo nucifera HOM05D003476 ORTHO05D004057 2.3e-27 125.9 94 68.1
Phvul.008G226300 Phaseolus vulgaris HOM05D003476 ORTHO05D004057 2.3e-27 125.9 78 71.8
Duzib128G2055 Durio zibethinus HOM05D003476 ORTHO05D004057 3.0e-27 125.6 94 68.1
PGSC0003DMG400025078 Solanum tuberosum HOM05D003476 ORTHO05D004057 3.0e-27 125.6 93 72.0
EL10Ac2g04131 Beta vulgaris HOM05D003476 ORTHO05D004057 3.9e-27 125.2 84 72.6
Cfa001366 Carpinus fangiana HOM05D003476 ORTHO05D004057 3.9e-27 125.2 100 66.0
CiPaw.01G295800 Carya illinoinensis HOM05D003476 ORTHO05D004057 3.9e-27 125.2 94 72.3
TWI73G1058 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 3.9e-27 125.2 74 78.4
CARHR134890 Cardamine hirsuta HOM05D003476 ORTHO05D004057 5.1e-27 124.8 91 65.9
Cpa.g.c40050 Carica papaya HOM05D003476 ORTHO05D004057 6.7e-27 124.4 75 76.0
COL.COLO4_25658 Corchorus olitorius HOM05D003476 ORTHO05D004057 6.7e-27 124.4 103 62.1
Haze_17184 Corylus avellana HOM05D003476 ORTHO05D004057 6.7e-27 124.4 103 61.2
Glyma.14G061900 Glycine max HOM05D003476 ORTHO05D004057 6.7e-27 124.4 78 71.8
MD15G1038100 Malus domestica HOM05D003476 ORTHO05D004057 8.7e-27 124.0 104 62.5
Potri.008G064700 Populus trichocarpa HOM05D003476 ORTHO05D004057 8.7e-27 124.0 96 68.8
BcaB06g29118 Brassica carinata HOM05D003476 ORTHO05D004057 1.1e-26 123.6 88 68.2
BcaC01g05451 Brassica carinata HOM05D003476 ORTHO05D004057 1.1e-26 123.6 85 69.4
Prupe.1G392100 Prunus persica HOM05D003476 ORTHO05D004057 1.1e-26 123.6 102 60.8
Solyc04g072032.1 Solanum lycopersicum HOM05D003476 ORTHO05D004057 1.1e-26 123.6 93 72.0
TWI73G1048 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.1e-26 123.6 74 77.0
BraA03t11468Z Brassica rapa HOM05D003476 ORTHO05D004057 1.5e-26 123.2 90 64.4
Carub.0004s2209 Capsella rubella HOM05D003476 ORTHO05D004057 1.5e-26 123.2 94 67.0
Manes.07G125600 Manihot esculenta HOM05D003476 ORTHO05D004057 1.5e-26 123.2 78 71.8
AT2G39960 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.9e-26 122.9 82 70.7
Gohir.D10G243900 Gossypium hirsutum HOM05D003476 ORTHO05D004057 2.5e-26 122.5 103 67.0
LjContig00357g0022102 Lotus japonicus HOM05D003476 ORTHO05D004057 2.5e-26 122.5 82 72.0
THA.LOC104810073 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 2.5e-26 122.5 78 69.2
THA.LOC104824307 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 2.5e-26 122.5 79 68.4
AL4G37540 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 3.3e-26 122.1 80 71.2
C03p26520 Brassica napus HOM05D003476 ORTHO05D004057 3.3e-26 122.1 82 70.7
Thhalv10017265m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 3.3e-26 122.1 99 63.6
Gohir.A13G016600 Gossypium hirsutum HOM05D003476 ORTHO05D004057 3.3e-26 122.1 94 68.1
MD01G1147400 Malus domestica HOM05D003476 ORTHO05D004057 3.3e-26 122.1 82 73.2
Gohir.D13G017700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 5.7e-26 121.3 94 68.1
BcaC02g07386 Brassica carinata HOM05D003476 ORTHO05D004057 7.4e-26 120.9 82 70.7
BolC4t28272H Brassica oleracea HOM05D003476 ORTHO05D004057 7.4e-26 120.9 82 70.7
Ca_05932_v3 Cicer arietinum L. HOM05D003476 ORTHO05D004057 7.4e-26 120.9 78 71.8
MD08G1058400 Malus domestica HOM05D003476 ORTHO05D004057 9.7e-26 120.6 87 67.8
Manes.10G017601 Manihot esculenta HOM05D003476 ORTHO05D004057 9.7e-26 120.6 73 78.1
Sp4g22270 Schrenkiella parvula HOM05D003476 ORTHO05D004057 9.7e-26 120.6 80 71.2
BcaB01g03582 Brassica carinata HOM05D003476 ORTHO05D004057 1.3e-25 120.2 96 62.5
A04p30180 Brassica napus HOM05D003476 ORTHO05D004057 1.3e-25 120.2 96 63.5
Sabra08G0047500 Salix brachista HOM05D003476 ORTHO05D004057 1.3e-25 120.2 91 62.6
Sc06g0000400 Simmondsia chinensis HOM05D003476 ORTHO05D004057 1.3e-25 120.2 90 68.9
vmacro06993 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.3e-25 120.2 71 80.3
Nitab4.5_0000099g0220 Nicotiana tabacum HOM05D003476 ORTHO05D004057 1.6e-25 119.8 94 63.8
BcaB02g09065 Brassica carinata HOM05D003476 ORTHO05D004057 2.2e-25 119.4 92 64.1
Duzib106G0197 Durio zibethinus HOM05D003476 ORTHO05D004057 2.2e-25 119.4 75 70.7
Eucgr.G03033 Eucalyptus grandis HOM05D003476 ORTHO05D004057 2.8e-25 119.0 97 66.0
A05p06460 Brassica napus HOM05D003476 ORTHO05D004057 3.7e-25 118.6 113 54.9
Carub.0006s3211 Capsella rubella HOM05D003476 ORTHO05D004057 6.3e-25 117.9 96 62.5
FAN15G1698 Fragaria x ananassa HOM05D003476 ORTHO05D004057 6.3e-25 117.9 85 63.5
TAR636G1152 Trochodendron aralioides HOM05D003476 ORTHO05D004057 6.3e-25 117.9 100 65.0
TAR636G3666 Trochodendron aralioides HOM05D003476 ORTHO05D004057 6.3e-25 117.9 84 72.6
Gohir.A10G229700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 8.2e-25 117.5 103 67.0
A03p22400 Brassica napus HOM05D003476 ORTHO05D004057 1.1e-24 117.1 80 70.0
LjContig00357g0025168 Lotus japonicus HOM05D003476 ORTHO05D004057 1.1e-24 117.1 78 66.7
Aqoxy214s003 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 1.4e-24 116.7 73 74.0
CAN.G1252.7 Capsicum annuum HOM05D003476 ORTHO05D004057 1.4e-24 116.7 96 60.4
Gorai.013G019600 Gossypium raimondii HOM05D003476 ORTHO05D004057 1.4e-24 116.7 97 62.9
Aqoxy4G02660 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 1.8e-24 116.3 84 66.7
AL6G47820 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 3.1e-24 115.5 84 66.7
Nn2g13624 Nelumbo nucifera HOM05D003476 ORTHO05D004057 4.1e-24 115.2 84 69.0
CARHR253320 Cardamine hirsuta HOM05D003476 ORTHO05D004057 5.3e-24 114.8 90 64.4
MELO3C025156.2 Cucumis melo HOM05D003476 ORTHO05D004057 5.3e-24 114.8 67 79.1
Actinidia00934 Actinidia chinensis HOM05D003476 ORTHO05D004057 6.9e-24 114.4 72 75.0
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 9.0e-24 114.0 103 63.1
RcHm_v2.0_Chr6g0299621 Rosa chinensis HOM05D003476 ORTHO05D004057 1.5e-23 113.2 79 65.8
Peaxi162Scf00360g00616 Petunia axillaris HOM05D003476 ORTHO05D004057 2.0e-23 112.8 93 65.6
Sp6g04580 Schrenkiella parvula HOM05D003476 ORTHO05D004057 2.6e-23 112.5 82 63.4
Gorai.011G280300 Gossypium raimondii HOM05D003476 ORTHO05D004057 1.3e-22 110.2 88 67.0
HPP92_016193 Vanilla planifolia HOM05D003476 ORTHO05D004057 5.0e-22 108.2 77 68.8
Zm00001eb081650 Zea mays HOM05D003476 ORTHO05D004057 6.5e-22 107.8 88 60.2
Os04g0446300 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.4e-21 106.7 88 59.1
Thhalv10028970m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 1.9e-21 106.3 120 45.8
PSO339G6737 Papaver somniferum HOM05D003476 ORTHO05D004057 2.5e-21 105.9 103 57.3
PSO801G0598 Papaver somniferum HOM05D003476 ORTHO05D004057 3.2e-21 105.5 103 57.3
ATR0618G113 Amborella trichopoda HOM05D003476 ORTHO05D004057 2.7e-20 102.4 81 63.0
SEGI_14870 Sequoiadendron giganteum HOM05D003476 ORTHO05D004057 3.9e-19 98.6 78 59.0
Os02g0565200 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.5e-18 96.7 73 61.6
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.7e-17 93.2 74 63.5
MBI14_g30458_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 1.7e-17 93.2 74 63.5
Mapoly0043s0045 Marchantia polymorpha HOM05D003476 ORTHO05D004057 4.8e-17 91.7 74 55.4
Pp3c24_20710 Physcomitrium patens HOM05D003476 ORTHO05D004057 1.8e-16 89.7 87 49.4
Pp3c8_24950 Physcomitrium patens HOM05D003476 ORTHO05D004057 2.4e-16 89.4 90 47.8
Ah.10g035550 Amaranthus hybridus HOM05D003476 ORTHO05D004057 4.1e-16 88.6 69 62.3
CsaV3_5G008920 Cucumis sativus L. HOM05D003476 ORTHO05D004057 4.1e-16 88.6 63 69.8
MBI16_g28612_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 4.1e-16 88.6 84 56.0
SpUn0110_0020 Schrenkiella parvula HOM05D003476 ORTHO05D004057 4.1e-16 88.6 67 59.7
AUR62031591 Chenopodium quinoa HOM05D003476 ORTHO05D004057 1.2e-15 87.0 69 60.9
AT4G04200 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.5e-15 86.7 67 64.2
AUR62012465 Chenopodium quinoa HOM05D003476 ORTHO05D004057 7.7e-15 84.3 61 65.6
BraA05t19614Z Brassica rapa HOM05D003476 ORTHO05D004057 2.2e-14 82.8 82 53.7
Duzib114G0190 Durio zibethinus HOM05D003476 ORTHO05D004057 1.4e-13 80.1 69 63.8
Ah.16g104950 Amaranthus hybridus HOM05D003476 ORTHO05D004057 4.2e-13 78.6 69 56.5
Migut.F01424 Erythranthe guttata HOM05D003476 ORTHO05D004057 1.2e-12 77.0 63 65.1
ECA233G2895 Erigeron canadensis HOM05D003476 ORTHO05D004057 1.6e-12 76.6 47 78.7
Aa31LG5G19650 Aethionema arabicum HOM05D003476 ORTHO05D004057 2.7e-12 75.9 66 53.0
MBI14_g06613_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 1.4e-11 73.6 71 53.5
AagrBONN_evm.TU.Sc2ySwM_228.5500 Anthoceros agrestis HOM05D003476 ORTHO05D004057 5.1e-11 71.6 82 42.7
C04p67700 Brassica napus HOM05D003476 ORTHO05D004057 2.0e-10 69.7 53 64.2
MD07G1214300 Malus domestica HOM05D003476 ORTHO05D004057 2.0e-10 69.7 53 66.0
Sc09g0010500 Simmondsia chinensis HOM05D003476 ORTHO05D004057 2.0e-10 69.7 49 77.6
C04p07540 Brassica napus HOM05D003476 ORTHO05D004057 5.7e-10 68.2 75 49.3
BolC4t22371H Brassica oleracea HOM05D003476 ORTHO05D004057 5.7e-10 68.2 75 49.3
Hund03462 Selenicereus undatus HOM05D003476 ORTHO05D004057 9.7e-10 67.4 49 59.2
Psat2g035640 Pisum sativum HOM05D003476 ORTHO05D004057 2.2e-09 66.2 42 66.7
CDE03G0334 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 1.8e-08 63.2 41 73.2
Dinv34422 Davidia involucrata HOM05D002885 ORTHO05D003350 2.4e-08 62.8 51 62.7
FvH4_2g40940 Fragaria vesca HOM05D003476 ORTHO05D004057 2.4e-08 62.8 126 34.1
CDE04G3620 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 5.3e-08 61.6 41 75.6
Medtr8g093950 Medicago truncatula HOM05D003476 ORTHO05D004057 1.5e-07 60.1 41 73.2
Aqoxy2G00973 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 1.3e-06 57.0 63 55.6
Cre12.g524200 Chlamydomonas reinhardtii HOM05D003476 ORTHO05D004057 1.3e-06 57.0 90 40.0
PRCOL_00000631 Prasinoderma coloniale HOM05D003476 ORTHO05D004057 6.5e-06 54.7 71 43.7


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