Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 3.8e-50 201.4 121 100.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 6.8e-31 137.5 119 63.0
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 5.7e-30 134.4 119 64.7
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 2.9e-29 132.1 119 57.1
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 6.4e-29 131.0 117 59.8
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.1e-28 130.2 121 65.3
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.8e-28 129.4 128 58.6
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 1.8e-28 129.4 120 60.0
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.8e-28 129.4 117 59.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 3.2e-28 128.6 72 84.7
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.2e-28 128.6 117 59.0
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 4.1e-28 128.3 119 60.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 4.1e-28 128.3 122 59.0
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 4.1e-28 128.3 121 62.8
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 5.4e-28 127.9 119 57.1
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 9.2e-28 127.1 128 57.0
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 1.2e-27 126.7 118 61.0
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.2e-27 126.7 119 57.1
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.2e-27 126.7 120 59.2
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 2.0e-27 125.9 119 57.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 2.0e-27 125.9 122 59.8
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 2.0e-27 125.9 119 57.1
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 2.7e-27 125.6 119 60.5
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 3.5e-27 125.2 120 58.3
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 3.5e-27 125.2 120 58.3
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 3.5e-27 125.2 119 66.4
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 4.6e-27 124.8 119 56.3
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 4.6e-27 124.8 120 58.3
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.0e-26 123.6 119 61.3
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.3e-26 123.2 120 56.7
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 2.3e-26 122.5 121 58.7
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 6.6e-26 120.9 117 59.0
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 6.6e-26 120.9 119 65.5
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.9e-25 119.4 121 58.7
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.3e-25 118.6 118 58.5
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 3.3e-25 118.6 119 55.5
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 4.3e-25 118.2 118 54.2
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 7.3e-25 117.5 110 60.9
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.2e-24 116.7 121 52.1
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.2e-24 116.7 121 57.0
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.6e-24 116.3 119 52.9
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.6e-24 116.3 126 54.0
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.6e-24 116.3 119 52.1
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.6e-24 116.3 121 52.1
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.6e-24 116.3 121 52.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.6e-24 116.3 121 55.4
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.1e-24 115.9 68 77.9
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 2.1e-24 115.9 121 52.1
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 2.8e-24 115.5 121 52.9
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 2.8e-24 115.5 121 52.9
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.8e-24 115.5 118 55.1
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 3.6e-24 115.2 119 51.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 3.6e-24 115.2 121 52.1
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 6.2e-24 114.4 120 70.0
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 6.2e-24 114.4 122 52.5
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 8.0e-24 114.0 67 76.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 8.0e-24 114.0 123 67.5
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.4e-23 113.2 73 75.3
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.8e-23 112.8 122 51.6
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 1.8e-23 112.8 121 52.1
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 2.3e-23 112.5 78 75.6
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 3.1e-23 112.1 119 52.1
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 3.1e-23 112.1 122 54.9
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 4.0e-23 111.7 63 81.0
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 4.0e-23 111.7 120 54.2
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 4.0e-23 111.7 121 52.1
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 8.9e-23 110.5 120 53.3
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 8.9e-23 110.5 120 52.5
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 8.9e-23 110.5 127 53.5
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 8.9e-23 110.5 122 54.1
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 1.2e-22 110.2 117 56.4
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.6e-22 109.0 119 52.1
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 3.4e-22 108.6 118 62.7
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 3.4e-22 108.6 72 70.8
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 4.4e-22 108.2 117 56.4
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.3e-21 106.7 121 49.6
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.3e-21 106.7 61 77.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.3e-21 106.7 124 48.4
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 2.9e-21 105.5 63 71.4
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 4.9e-21 104.8 68 70.6
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 8.3e-21 104.0 114 58.8
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 2.4e-20 102.4 127 52.8
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 2.4e-20 102.4 118 50.0
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 3.2e-20 102.1 63 69.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.4e-20 101.3 114 58.8
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 7.0e-20 100.9 68 67.6
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.2e-19 100.1 112 52.7
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 2.7e-19 99.0 66 72.7
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.5e-19 98.6 72 66.7
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.0e-18 97.1 140 46.4
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.3e-18 96.7 114 47.4
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.3e-18 95.9 66 71.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.3e-18 95.9 66 71.2
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 2.3e-18 95.9 105 54.3
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 5.0e-18 94.7 120 46.7
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.5e-17 93.2 107 50.5
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 9.5e-17 90.5 73 57.5
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 1.8e-15 86.3 119 41.2
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 2.3e-15 85.9 103 58.3
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 3.1e-15 85.5 122 45.1
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.2e-14 83.6 109 50.5
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.0e-14 82.8 57 70.2
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.6e-14 82.4 107 48.6
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 7.5e-14 80.9 120 43.3
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 9.8e-14 80.5 70 54.3
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 9.8e-14 80.5 119 40.3
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 2.9e-13 79.0 110 49.1
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 3.7e-13 78.6 66 57.6
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 9.2e-12 73.9 57 61.4
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 2.7e-11 72.4 70 57.1
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 3.5e-11 72.0 73 56.2
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 1.9e-09 66.2 65 55.4
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 6.2e-08 61.2 121 43.0
SEGI_16463 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 4.4e-06 55.1 53 54.7
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 9.9e-06 53.9 52 59.6


User provided reference genes

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