Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.2e-174 616.3 294 100.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.7e-120 436.4 272 71.3
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.7e-120 436.4 268 74.3
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 2.4e-114 416.0 270 69.3
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 4.5e-113 411.8 271 67.9
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 4.7e-110 401.7 271 66.4
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 4.0e-109 398.7 275 63.3
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 5.2e-109 398.3 275 65.5
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.2e-108 397.1 272 66.2
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 1.2e-108 397.1 275 66.2
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.5e-108 396.7 275 66.2
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.0e-108 396.4 274 66.1
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 2.6e-108 396.0 275 65.1
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 2.2e-107 392.9 276 63.4
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.2e-107 392.9 299 62.2
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 4.9e-107 391.7 270 63.7
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 6.3e-107 391.3 277 62.1
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.1e-106 390.6 277 63.5
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 2.4e-106 389.4 273 62.6
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 3.1e-106 389.0 254 67.3
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.7e-105 386.0 269 63.2
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 3.5e-105 385.6 273 63.7
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 4.5e-105 385.2 274 63.9
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 7.7e-105 384.4 276 63.0
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 2.5e-103 379.4 272 66.2
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.5e-103 379.4 275 60.7
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 3.3e-103 379.0 299 58.9
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 5.6e-103 378.3 270 63.3
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 7.3e-103 377.9 277 59.6
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 9.5e-103 377.5 280 61.8
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.6e-102 376.7 278 63.3
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.1e-102 376.3 278 59.0
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 2.8e-102 375.9 273 60.8
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.8e-102 375.9 281 60.5
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 3.6e-102 375.6 257 63.8
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 8.0e-102 374.4 293 60.1
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.0e-101 374.0 273 60.1
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.4e-101 373.6 293 60.1
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.3e-101 372.9 275 61.5
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 3.0e-101 372.5 270 60.4
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 5.2e-101 371.7 273 61.5
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 5.2e-101 371.7 333 54.1
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 6.8e-101 371.3 273 59.7
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 2.6e-100 369.4 266 60.5
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 5.7e-100 368.2 283 59.7
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 4.1e-98 362.1 227 72.2
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 9.2e-98 360.9 268 63.4
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.6e-97 358.6 281 60.5
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.7e-96 356.7 273 61.5
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 6.6e-96 354.8 272 60.7
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.5e-95 353.6 275 57.5
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 3.3e-95 352.4 273 60.4
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 3.3e-95 352.4 326 52.8
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 7.3e-95 351.3 247 64.4
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 9.5e-95 350.9 269 60.2
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 3.6e-94 349.0 274 58.4
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 6.2e-94 348.2 278 60.4
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.4e-93 347.1 273 59.3
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 8.9e-93 344.4 273 58.6
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.4e-92 342.0 258 59.7
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 5.8e-92 341.7 271 56.8
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 2.2e-91 339.7 332 48.2
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 4.9e-91 338.6 279 57.7
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.4e-90 337.0 305 50.5
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 1.9e-90 336.7 269 56.1
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 5.4e-90 335.1 267 55.8
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 7.0e-90 334.7 268 56.7
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.7e-88 330.1 269 56.5
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.3e-88 329.7 266 59.8
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 2.3e-88 329.7 257 58.8
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.1e-87 327.4 252 58.7
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 3.3e-87 325.9 252 57.5
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 3.3e-87 325.9 273 54.9
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.6e-87 325.1 273 58.2
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 5.6e-87 325.1 372 43.8
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 1.2e-86 323.9 270 55.6
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.4e-85 320.5 269 55.0
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 2.0e-84 316.6 258 53.5
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 3.4e-84 315.8 270 55.6
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.7e-81 306.2 207 64.7
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.0e-80 304.3 244 56.6
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.9e-80 302.4 282 51.1
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 8.6e-80 301.2 283 52.7
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 4.3e-79 298.9 235 55.7
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 2.1e-78 296.6 206 63.6
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 4.7e-78 295.4 210 63.8
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 4.7e-78 295.4 203 66.0
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 8.1e-78 294.7 254 54.7
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.1e-77 292.7 219 61.6
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 4.0e-77 292.4 261 51.7
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.6e-76 289.7 231 58.0
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 5.8e-76 288.5 202 60.9
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 5.8e-76 288.5 329 45.3
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.3e-75 287.3 202 62.9
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 8.4e-75 284.6 224 57.1
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 5.4e-74 282.0 193 62.2
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.6e-73 280.4 200 61.0
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 2.7e-73 279.6 207 61.4
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.7e-73 279.6 200 61.0
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 2.1e-70 270.0 188 67.6
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 6.9e-61 238.4 180 57.2
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.9e-58 230.3 354 37.0
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.8e-56 223.8 203 52.2
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.5e-55 219.9 262 42.7
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 4.3e-55 219.2 187 52.4
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 6.9e-53 211.8 135 70.4
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 3.8e-51 206.1 226 46.0
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 8.4e-51 204.9 269 38.3
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.4e-50 203.4 232 42.2
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 2.2e-43 180.3 182 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.2e-33 147.9 164 41.5
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 2.8e-30 136.7 183 38.3
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.8e-29 134.0 168 45.2
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.0e-27 128.3 123 50.4
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 5.0e-27 125.9 187 41.7
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 9.7e-23 111.7 242 31.0
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.9e-19 100.1 92 51.1
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.5e-15 87.8 74 47.3
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 2.2e-11 73.9 49 61.2
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 2.0e-07 60.8 73 41.1
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 5.7e-07 59.3 71 42.3
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 2.8e-06 57.0 68 48.5


User provided reference genes

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