Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 5.7e-272 940.3 460 100.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 3.4e-240 834.7 460 84.3
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 8.4e-239 830.1 460 83.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.5e-237 824.7 460 82.8
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 7.8e-237 823.5 460 82.6
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 7.8e-237 823.5 460 82.4
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.0e-236 823.2 460 82.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 3.0e-236 821.6 460 82.4
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.0e-236 821.6 460 82.4
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 9.6e-235 816.6 461 81.3
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.6e-234 815.8 460 82.2
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.7e-234 814.3 460 81.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.4e-233 812.0 460 81.3
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.4e-233 812.0 460 81.3
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.2e-233 810.8 460 80.4
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 80.9
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 8.9e-233 810.1 461 81.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.5e-232 809.3 460 80.7
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.5e-232 809.3 460 81.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.6e-232 808.5 460 80.9
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 3.4e-232 808.1 460 80.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 3.4e-232 808.1 475 77.7
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 5.8e-232 807.4 460 81.1
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 7.6e-232 807.0 460 80.2
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 9.9e-232 806.6 460 84.1
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.7e-231 805.8 460 80.7
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.7e-231 805.8 460 80.4
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 84.1
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 6.4e-231 803.9 461 79.8
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 6.4e-231 803.9 460 78.7
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.4e-230 802.0 460 81.3
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.4e-230 802.0 460 81.3
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 4.2e-230 801.2 459 80.0
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 5.4e-230 800.8 460 79.3
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 5.4e-230 800.8 461 80.3
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.1e-229 798.9 461 79.8
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 4.6e-229 797.7 461 79.6
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 6.0e-229 797.3 460 79.1
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.7e-228 795.8 461 79.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.7e-228 795.8 460 80.4
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.0e-228 795.0 461 79.6
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.1e-227 793.1 460 78.9
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.9e-227 792.3 460 78.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.3e-227 791.2 460 79.6
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 5.6e-227 790.8 462 79.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 7.3e-227 790.4 460 78.0
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 7.3e-227 790.4 460 79.8
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 7.3e-227 790.4 462 79.0
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.6e-226 789.3 460 78.0
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.6e-226 789.3 460 79.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.8e-226 788.5 460 78.3
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.8e-226 788.5 458 78.8
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.1e-225 786.6 460 79.3
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.4e-225 786.2 460 79.1
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.4e-225 785.4 460 79.1
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.4e-225 785.4 460 79.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.4e-225 785.4 460 77.8
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.4e-225 785.4 460 81.1
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.1e-225 785.0 460 80.7
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 5.3e-225 784.3 460 77.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 5.3e-225 784.3 460 77.6
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.2e-224 783.1 460 76.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.5e-224 782.7 461 76.8
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.4e-224 781.6 460 77.8
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 7.6e-224 780.4 460 77.6
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.3e-223 779.6 460 78.7
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.2e-223 778.9 460 80.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.6e-221 772.7 487 75.6
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.0e-220 770.0 481 75.5
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 2.5e-219 765.4 462 76.0
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 3.1e-217 758.4 453 75.7
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.9e-215 751.9 460 79.1
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 5.5e-214 747.7 443 75.6
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.6e-213 746.1 498 70.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.6e-210 736.1 458 73.1
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.8e-210 735.3 460 74.8
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 5.3e-209 731.1 460 74.1
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.5e-207 724.2 458 72.7
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.2e-206 721.5 469 72.1
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 5.5e-206 721.1 461 72.2
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 9.3e-206 720.3 460 73.5
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.3e-204 716.5 460 75.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.4e-188 663.3 499 63.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.0e-188 662.1 460 68.3
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 8.8e-188 660.6 454 67.8
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 3.3e-179 632.1 458 65.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.8e-178 629.0 456 63.8
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 9.1e-177 624.0 393 73.3
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.0e-175 618.2 451 61.9
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 5.5e-174 614.8 462 62.8
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.1e-173 612.8 451 61.9
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.5e-171 606.7 337 87.8
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.1e-169 600.5 337 82.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 6.5e-167 591.3 341 81.2
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.5e-166 589.3 339 81.4
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 7.2e-166 587.8 338 84.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.7e-165 585.9 461 58.8
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.1e-165 584.7 339 81.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 8.0e-165 584.3 338 81.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.3e-164 582.8 338 81.1
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 2.3e-164 582.8 338 81.1
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.1e-161 573.9 338 80.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 4.1e-161 572.0 321 82.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 8.3e-154 547.7 337 81.9
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.4e-153 547.0 302 89.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.0e-152 543.1 311 81.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.5e-147 526.9 313 84.0
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 5.4e-145 518.5 291 82.1
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.3e-142 509.2 291 81.8
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.8e-132 476.9 277 76.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 8.9e-132 474.6 338 66.0
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 9.2e-121 438.0 280 71.8
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.7e-98 364.0 450 40.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.0e-91 340.5 484 37.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.9e-74 283.5 160 79.4
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.2e-51 208.4 163 62.0
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-44 184.5 110 78.2
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-44 184.5 110 78.2
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.1e-44 183.3 110 77.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 6.3e-37 159.5 95 80.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.1e-08 64.7 40 70.0


User provided reference genes

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