Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 4.6e-211 737.6 379 100.0
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 3.6e-163 578.6 378 78.6
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.9e-160 568.9 380 77.1
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 4.9e-160 568.2 378 76.2
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.9e-160 568.2 380 76.8
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.9e-159 566.2 378 77.0
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 7.0e-159 564.3 378 76.5
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 2.3e-157 559.3 378 74.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 3.0e-157 558.9 378 72.5
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 3.9e-157 558.5 379 74.9
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.5e-156 556.6 378 73.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 4.3e-156 555.1 378 74.6
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 4.3e-156 555.1 378 74.6
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 9.5e-156 553.9 378 73.8
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 8.1e-155 550.8 379 74.1
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.1e-154 550.4 378 73.5
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.4e-154 550.1 378 74.1
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.1e-154 548.9 378 73.5
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 3.1e-154 548.9 378 73.8
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 5.2e-154 548.1 378 73.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.2e-153 547.0 378 73.5
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.5e-153 546.6 379 73.6
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.6e-153 545.8 378 74.6
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 5.8e-153 544.7 379 73.6
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 7.5e-153 544.3 378 74.1
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 9.9e-153 543.9 378 73.3
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 9.9e-153 543.9 406 69.7
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.3e-152 543.5 378 73.5
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 6.4e-152 541.2 378 71.7
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 8.3e-152 540.8 378 73.3
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 3.2e-151 538.9 378 72.2
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 9.2e-151 537.3 382 71.7
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 4.6e-150 535.0 384 71.4
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 6.0e-150 534.6 363 76.0
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.3e-149 533.5 406 68.5
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.9e-149 531.9 431 65.4
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 6.6e-149 531.2 382 70.9
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.9e-148 529.6 378 70.4
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 3.3e-148 528.9 378 70.9
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 7.3e-148 527.7 378 70.1
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.6e-147 526.6 382 71.2
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 2.1e-147 526.2 401 67.3
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.1e-147 526.2 378 71.2
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.1e-147 526.2 378 70.4
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 2.8e-147 525.8 407 66.6
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.8e-147 525.8 397 68.3
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.8e-147 525.8 378 69.8
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 8.1e-147 524.2 378 70.6
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.4e-146 523.5 378 70.9
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 8.9e-146 520.8 433 65.4
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.5e-145 520.0 431 66.6
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.6e-145 519.2 388 68.3
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 9.9e-145 517.3 378 69.8
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 3.8e-144 515.4 378 69.0
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.9e-144 515.0 388 70.6
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 6.4e-144 514.6 378 69.0
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.1e-143 513.8 378 69.0
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.4e-143 513.5 378 69.3
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 5.4e-143 511.5 383 69.5
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 5.4e-143 511.5 378 68.5
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.6e-142 510.0 378 68.0
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 2.1e-142 509.6 378 69.0
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 2.7e-142 509.2 357 72.0
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 6.0e-142 508.1 379 68.3
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-141 506.9 378 69.0
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 3.0e-141 505.8 378 68.0
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 8.6e-141 504.2 378 68.5
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 8.6e-141 504.2 378 66.7
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-138 497.3 380 66.1
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 2.0e-137 493.0 378 65.6
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 4.4e-137 491.9 380 66.1
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 9.9e-137 490.7 380 65.0
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 9.9e-137 490.7 372 67.5
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.7e-136 490.0 380 65.0
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-136 490.0 409 63.6
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 3.8e-136 488.8 380 66.1
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 3.8e-136 488.8 378 64.6
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 4.9e-136 488.4 378 64.8
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.1e-135 487.3 378 64.6
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.1e-135 487.3 378 64.8
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 4.6e-134 481.9 387 64.1
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.7e-133 479.9 378 64.0
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.9e-133 478.8 383 63.7
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 3.3e-132 475.7 379 64.4
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.3e-132 475.7 378 65.3
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 5.6e-132 474.9 379 64.4
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 5.6e-132 474.9 458 55.9
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 7.3e-132 474.6 379 64.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 8.1e-131 471.1 379 63.6
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 8.1e-131 471.1 379 63.6
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 1.8e-130 469.9 332 72.9
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 9.0e-130 467.6 386 62.7
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 2.2e-128 463.0 396 61.6
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.0e-125 452.6 378 64.0
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.4e-122 443.7 323 70.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.0e-121 439.9 378 61.1
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 2.6e-121 439.5 383 60.3
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 2.1e-118 429.9 383 59.5
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.7e-118 429.5 380 59.5
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.6e-118 428.7 382 59.7
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 6.7e-117 424.9 271 80.1
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.5e-113 413.7 411 55.7
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 5.1e-109 398.7 389 55.3
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.4e-103 380.6 271 72.0
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 7.9e-102 374.8 387 54.0
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 8.5e-72 275.0 419 41.8
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.9e-71 273.9 245 58.8
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.8e-61 240.7 459 35.1
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.3e-59 231.9 158 71.5
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.2e-58 228.4 161 70.2
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.0e-57 227.3 158 70.9
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.7e-49 200.3 148 68.9
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.3e-47 192.2 161 61.5
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 3.6e-46 189.9 339 36.9
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 6.6e-40 169.1 129 64.3
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 3.3e-39 166.8 136 58.8
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 3.1e-37 160.2 109 77.1
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 5.8e-36 156.0 102 71.6
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.5e-36 155.6 126 61.1
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 8.1e-30 135.6 102 64.7
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.9e-26 124.4 95 67.4
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 8.1e-22 109.0 84 65.5
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.8e-14 84.0 124 39.5
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 9.3e-10 68.9 39 84.6
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 2.1e-09 67.8 39 82.1
Cfa026867 Carpinus fangiana HOM05D000892 ORTHO05D005341 8.1e-06 55.8 146 27.4
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 8.1e-06 55.8 116 35.3


User provided reference genes

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