Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 6.2e-172 607.4 323 100.0
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 6.4e-60 235.3 312 51.6
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 6.4e-60 235.3 312 51.3
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 1.7e-57 227.3 331 49.5
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 1.1e-56 224.6 313 50.2
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 1.8e-54 217.2 315 50.5
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 8.9e-54 214.9 335 46.9
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 2.4e-51 206.8 324 46.6
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 3.5e-50 203.0 312 51.0
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 1.3e-49 201.1 299 47.5
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 2.3e-49 200.3 337 47.8
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 3.0e-49 199.9 285 50.2
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 8.7e-49 198.4 317 47.0
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 1.5e-48 197.6 304 48.7
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 1.9e-48 197.2 332 46.7
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 7.3e-48 195.3 323 46.1
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 1.2e-47 194.5 269 49.8
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 8.1e-47 191.8 303 49.2
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 6.9e-46 188.7 311 42.8
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 3.4e-45 186.4 306 46.7
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.4e-45 186.4 306 46.7
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.4e-45 186.4 306 46.7
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 7.6e-45 185.3 297 48.5
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 2.2e-44 183.7 320 45.3
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.1e-43 181.4 306 46.4
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 4.2e-43 179.5 273 49.1
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 5.4e-43 179.1 318 42.5
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 1.2e-42 177.9 302 43.7
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 1.2e-42 177.9 333 44.1
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 6.6e-41 172.2 309 46.3
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 8.7e-41 171.8 286 50.0
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.1e-40 171.4 274 48.2
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 2.5e-40 170.2 298 44.6
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 9.6e-40 168.3 305 45.2
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 1.3e-39 167.9 301 45.5
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 2.1e-39 167.2 300 42.0
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 8.1e-39 165.2 319 43.6
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 2.4e-38 163.7 227 50.7
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 4.0e-38 162.9 284 43.0
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.5e-37 161.0 315 43.5
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 1.5e-37 161.0 296 47.0
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 2.0e-37 160.6 266 47.4
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 2.6e-37 160.2 298 44.6
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 9.9e-37 158.3 295 42.0
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 4.6e-34 149.4 306 40.8
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.3e-33 147.1 282 43.3
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 8.7e-33 145.2 298 41.3
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 1.9e-32 144.1 303 40.9
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 3.7e-31 139.8 247 47.4
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 1.1e-30 138.3 305 40.0
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 4.0e-30 136.3 295 42.4
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 5.3e-30 136.0 270 42.6
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.5e-29 134.4 312 41.3
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.6e-29 133.7 343 36.4
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 4.9e-28 129.4 390 33.8
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 6.4e-28 129.0 297 39.1
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 8.4e-28 128.6 311 39.2
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 3.2e-27 126.7 281 37.7
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 3.2e-27 126.7 301 38.9
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 1.6e-26 124.4 314 38.2
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 2.7e-26 123.6 314 37.3
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 2.7e-26 123.6 316 40.2
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 6.0e-26 122.5 343 36.2
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.5e-24 117.9 307 34.2
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 1.6e-23 114.4 312 36.5
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 1.6e-23 114.4 312 35.9
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 2.1e-23 114.0 320 36.6
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 1.4e-22 111.3 314 36.3
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 2.4e-22 110.5 309 35.3
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 3.1e-22 110.2 272 39.7
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 5.3e-22 109.4 169 46.7
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 2.6e-21 107.1 332 33.4
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 5.8e-21 105.9 265 40.4
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 8.4e-20 102.1 282 36.9
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 2.5e-19 100.5 268 35.8
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 6.7e-17 92.4 283 35.0
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 6.7e-17 92.4 305 35.7
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 8.7e-17 92.0 307 33.6
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 2.5e-16 90.5 329 36.2
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 3.3e-16 90.1 327 32.1
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 3.3e-16 90.1 327 32.1
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 3.3e-16 90.1 327 32.1
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 5.7e-16 89.4 308 34.7
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 7.4e-16 89.0 373 30.0
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 1.6e-15 87.8 327 31.8
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 1.8e-14 84.3 324 31.2
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 2.4e-14 84.0 305 31.5
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 2.6e-13 80.5 142 43.0
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.7e-12 77.8 252 32.5
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 4.2e-11 73.2 354 29.7
A02p12160 Brassica napus HOM05D007548 ORTHO05D009527 1.2e-10 71.6 322 29.2
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.4e-09 68.2 182 37.4
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 1.8e-09 67.8 126 41.3
BolC2t08158H Brassica oleracea HOM05D007548 ORTHO05D009527 1.8e-09 67.8 322 27.6
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 3.0e-09 67.0 133 36.8
BcaC03g14581 Brassica carinata HOM05D007548 ORTHO05D009527 1.1e-08 65.1 143 39.9
BraA02t06280Z Brassica rapa HOM05D007548 ORTHO05D009527 4.3e-08 63.2 299 27.8


User provided reference genes

Program Settings