Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 0.0e+00 2355.5 1202 100.0
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 1.0e-174 618.6 1245 38.5
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 3.8e-166 590.1 1246 36.9
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 5.9e-143 513.1 1249 35.9
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 2.7e-135 487.6 1248 34.5
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.3e-134 485.3 1275 35.8
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 1.1e-133 482.3 1246 34.3
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 4.6e-119 433.7 1336 33.1
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 3.3e-117 427.6 1192 33.2
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 1.9e-112 411.8 1238 32.2
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 7.0e-112 409.8 1186 33.4
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 1.9e-104 385.2 1258 32.1
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.6e-103 382.1 1301 31.4
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 3.3e-101 374.4 1170 30.9
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 1.2e-100 372.5 1205 31.9
Migut.F00307 Erythranthe guttata HOM05D006627 ORTHO05D007753 1.4e-88 332.4 1228 31.2
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.9e-88 332.0 1144 32.1
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 1.9e-88 332.0 1144 32.1
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 3.9e-86 324.3 1240 30.6
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 1.1e-85 322.8 1214 30.7
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 7.3e-85 320.1 1263 30.8
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 9.3e-80 303.1 1299 28.9
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.1e-79 302.0 1472 29.1
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 3.0e-78 298.1 1248 29.9
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 2.8e-76 291.6 1272 28.2
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 3.6e-76 291.2 1474 28.2
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 4.8e-76 290.8 1223 30.0
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 6.2e-76 290.4 1240 30.2
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.4e-72 278.5 1414 29.1
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 4.6e-71 274.2 1205 29.4
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 1.8e-70 272.3 1247 28.6
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 2.5e-69 268.5 1330 28.3
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 3.7e-68 264.6 1226 27.7
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 2.2e-65 255.4 1246 27.4
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.5e-64 251.9 1399 28.6
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 8.7e-62 243.4 1278 27.9
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 4.1e-59 234.6 1254 26.1
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 5.3e-59 234.2 1190 28.6
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 6.9e-59 233.8 1277 27.6
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 7.6e-58 230.3 1305 26.9
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 1.0e-57 229.9 1272 27.6
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 3.2e-56 224.9 1249 27.9
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 7.2e-56 223.8 1315 25.7
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 7.2e-56 223.8 1248 27.8
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 9.3e-56 223.4 1249 27.9
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 3.6e-55 221.5 616 34.6
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 5.1e-54 217.6 1273 28.2
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.5e-53 216.1 1260 27.5
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.4e-53 213.8 1273 28.2
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 7.4e-53 213.8 1336 27.8
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.8e-52 211.8 1276 27.9
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.7e-52 211.5 1258 27.5
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.1e-51 209.9 1269 27.9
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.0e-50 205.7 1271 28.0
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.5e-50 204.5 1270 27.4
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.0e-49 203.4 1313 27.0
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 6.5e-49 200.7 1267 27.9
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 2.7e-47 195.3 184 57.1
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 4.6e-47 194.5 1362 27.0
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 4.6e-47 194.5 1470 25.4
unitig_46.g18802 Utricularia gibba HOM05D006627 ORTHO05D007753 1.0e-46 193.4 1221 26.2
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 7.4e-45 187.2 1343 25.0
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 7.4e-45 187.2 1343 25.0
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 9.7e-45 186.8 1251 26.6
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 2.8e-44 185.3 1356 25.0
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 4.8e-44 184.5 1307 26.6
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-43 183.3 524 33.6
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 7.7e-42 177.2 1235 25.2
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 1.0e-41 176.8 1293 25.7
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 8.5e-41 173.7 1342 24.9
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 3.2e-40 171.8 1311 26.0
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 2.1e-39 169.1 341 41.6
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 4.7e-39 167.9 1350 25.9
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 7.4e-37 160.6 1329 25.6
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 2.2e-33 149.1 1288 24.5
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 4.2e-32 144.8 1370 25.5
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 2.7e-31 142.1 1268 24.8
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 6.1e-31 141.0 1388 24.9
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 6.7e-30 137.5 1214 23.5
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.5e-29 136.3 1278 24.6
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 4.4e-29 134.8 1372 25.4
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.8e-28 132.1 1280 25.2
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 3.7e-28 131.7 879 25.1
unitig_747.g21861 Utricularia gibba HOM05D006627 ORTHO05D007753 2.9e-25 122.1 835 27.5
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 5.0e-25 121.3 1356 24.9
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 1.9e-24 119.4 1222 25.3
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.9e-24 119.4 1282 23.6
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 7.2e-24 117.5 1281 24.5
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 3.0e-22 112.1 1346 24.2
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.1e-19 103.6 328 30.5
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 2.0e-18 99.4 1194 23.7
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 4.5e-18 98.2 338 30.8
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 8.6e-17 94.0 1372 23.1
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.1e-16 93.6 1345 22.6
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 1.5e-16 93.2 1263 24.5
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 4.2e-16 91.7 344 31.7
Thhalv10024596m.g Eutrema salsugineum HOM05D008661 ORTHO05D010872 2.8e-15 89.0 306 31.7
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 2.3e-14 85.9 1281 23.2
Lsat_1_v5_gn_9_57440 Lactuca sativa HOM05D006627 ORTHO05D007753 2.2e-12 79.3 338 28.4
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 4.9e-12 78.2 299 28.4
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 1.1e-11 77.0 285 32.6
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 1.4e-11 76.6 1186 23.0
ECA238G4706 Erigeron canadensis HOM05D029832 ORTHO05D007753 2.4e-11 75.9 250 32.0
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 5.4e-11 74.7 343 26.8
HPP92_028524 Vanilla planifolia HOM05D061474 ORTHO05D007753 5.4e-11 74.7 283 30.0
HPP92_028535 Vanilla planifolia HOM05D061474 ORTHO05D007753 5.4e-11 74.7 283 30.0
unitig_37.g11967 Utricularia gibba HOM05D006627 ORTHO05D007753 2.5e-08 65.9 359 27.6
HanXRQChr14g0462471 Helianthus annuus HOM05D029832 ORTHO05D007753 4.3e-08 65.1 343 26.5
ECA233G3260 Erigeron canadensis HOM05D001089 ORTHO05D000920 5.6e-08 64.7 637 24.2
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 1.2e-07 63.5 1357 22.8
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 2.8e-07 62.4 309 27.2
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 1.0e-06 60.5 425 27.1
CDE07G1237 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 1.0e-06 60.5 775 23.5
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 1.0e-06 60.5 201 29.4
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 1.8e-06 59.7 968 23.1
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 4.0e-06 58.5 202 29.7
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 5.2e-06 58.2 389 25.2
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 6.8e-06 57.8 1345 21.8


User provided reference genes

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