Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 4.4e-90 334.7 185 100.0
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 5.3e-51 204.9 178 61.8
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 2.0e-50 203.0 168 58.3
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 2.6e-50 202.6 180 62.8
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 1.3e-49 200.3 190 55.8
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 1.3e-49 200.3 190 57.4
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 1.7e-49 199.9 186 57.5
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.2e-49 199.5 142 66.9
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 2.2e-49 199.5 142 66.9
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 2.9e-49 199.1 103 85.4
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 3.8e-49 198.7 168 59.5
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 3.8e-49 198.7 97 90.7
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 6.5e-49 198.0 100 88.0
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 8.5e-49 197.6 97 90.7
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 1.1e-48 197.2 97 88.7
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 1.4e-48 196.8 100 86.0
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 1.4e-48 196.8 100 88.0
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 2.5e-48 196.1 97 86.6
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 2.5e-48 196.1 169 61.5
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 2.5e-48 196.1 169 61.5
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 2.5e-48 196.1 164 59.8
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 3.2e-48 195.7 96 90.6
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 3.2e-48 195.7 97 87.6
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 4.2e-48 195.3 103 84.5
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.2e-48 195.3 97 86.6
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.2e-48 195.3 97 86.6
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.2e-48 195.3 97 86.6
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.2e-48 195.3 97 86.6
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 4.2e-48 195.3 97 85.6
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 4.2e-48 195.3 97 86.6
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 5.5e-48 194.9 178 55.1
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 5.5e-48 194.9 97 85.6
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 5.5e-48 194.9 97 87.6
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 7.2e-48 194.5 97 87.6
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 9.3e-48 194.1 97 86.6
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 9.3e-48 194.1 97 85.6
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 9.3e-48 194.1 97 84.5
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 9.3e-48 194.1 96 87.5
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 1.2e-47 193.7 97 88.7
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.2e-47 193.7 97 88.7
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.6e-47 193.4 97 88.7
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 1.6e-47 193.4 106 82.1
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 1.6e-47 193.4 100 84.0
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.6e-47 193.4 97 84.5
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 2.1e-47 193.0 104 83.7
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 2.1e-47 193.0 97 87.6
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 2.7e-47 192.6 96 86.5
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 2.7e-47 192.6 96 85.4
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 2.7e-47 192.6 98 84.7
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 2.7e-47 192.6 98 84.7
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 2.7e-47 192.6 98 84.7
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 3.6e-47 192.2 97 86.6
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 3.6e-47 192.2 153 62.7
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 6.1e-47 191.4 97 85.6
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 7.9e-47 191.0 162 58.0
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 7.9e-47 191.0 97 86.6
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.3e-46 190.3 108 78.7
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 1.3e-46 190.3 104 76.0
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 1.8e-46 189.9 98 83.7
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 1.8e-46 189.9 97 82.5
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.8e-46 189.9 97 86.6
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 2.3e-46 189.5 97 87.6
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 3.0e-46 189.1 98 84.7
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 3.0e-46 189.1 98 84.7
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 3.9e-46 188.7 97 83.5
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 5.1e-46 188.3 97 83.5
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 6.7e-46 188.0 96 87.5
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 6.7e-46 188.0 97 85.6
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 1.1e-45 187.2 97 83.5
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 1.1e-45 187.2 97 85.6
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.1e-45 187.2 97 84.5
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.5e-45 186.8 97 82.5
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.5e-45 186.8 97 82.5
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 1.5e-45 186.8 97 84.5
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 1.5e-45 186.8 100 80.0
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 82.5
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 82.5
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 82.5
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 82.5
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 84.5
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 85.6
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 2.5e-45 186.0 97 84.5
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 4.3e-45 185.3 97 81.4
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 7.4e-45 184.5 97 81.4
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 7.4e-45 184.5 196 52.0
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 9.7e-45 184.1 97 83.5
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 9.7e-45 184.1 97 81.4
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.3e-44 183.7 97 82.5
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 1.3e-44 183.7 104 78.8
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 1.6e-44 183.3 97 79.4
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 2.2e-44 183.0 97 84.5
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 2.2e-44 183.0 97 80.4
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 2.8e-44 182.6 96 83.3
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 2.8e-44 182.6 103 76.7
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 4.8e-44 181.8 97 80.4
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 8.2e-44 181.0 96 81.2
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.1e-43 180.6 97 82.5
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 1.1e-43 180.6 97 79.4
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 1.1e-43 180.6 196 51.0
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 1.8e-43 179.9 96 82.3
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 2.2e-41 172.9 97 75.3
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 3.2e-40 169.1 92 79.3
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 3.6e-39 165.6 167 50.3
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 3.0e-38 162.5 91 75.8
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 4.8e-36 155.2 88 75.0
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 6.5e-33 144.8 168 50.0
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.1e-32 144.1 185 47.0
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 3.2e-32 142.5 106 62.3
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.0e-29 133.3 151 50.3
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 7.4e-29 131.3 67 80.6
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 3.1e-27 125.9 68 77.9
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 5.3e-27 125.2 65 86.2
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 2.0e-26 123.2 63 79.4
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 8.0e-23 111.3 62 74.2
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 2.4e-19 99.8 52 75.0
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 1.3e-17 94.0 52 73.1
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 8.3e-12 74.7 36 94.4
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 9.1e-11 71.2 35 88.6


User provided reference genes

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