Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g01320 Coffea canephora HOM05D008056 ORTHO05D009804 5.6e-40 167.2 84 100.0
Dinv35348 Davidia involucrata HOM05D008056 ORTHO05D009804 7.3e-16 87.0 85 60.0
Hma1.2p1_0591F.1_g185220 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 2.8e-15 85.1 81 64.2
Actinidia34234 Actinidia chinensis HOM05D008056 ORTHO05D009804 8.1e-15 83.6 84 57.1
Actinidia08668 Actinidia chinensis HOM05D008056 ORTHO05D009804 6.8e-14 80.5 84 54.8
Rhsim03G0210900 Rhododendron simsii HOM05D008056 ORTHO05D009804 3.8e-12 74.7 80 55.0
Potri.012G017400 Populus trichocarpa HOM05D008056 ORTHO05D009804 1.1e-11 73.2 80 57.5
TAR629G0325 Trochodendron aralioides HOM05D008056 ORTHO05D009804 1.1e-11 73.2 85 55.3
GSVIVG01038573001 Vitis vinifera HOM05D008056 ORTHO05D009804 1.9e-11 72.4 75 50.7
Dinv29260 Davidia involucrata HOM05D008056 ORTHO05D009804 7.1e-11 70.5 84 57.1
Ciclev10023143m.g Citrus clementina HOM05D008056 ORTHO05D009804 1.2e-10 69.7 79 59.5
Nitab4.5_0000548g0010 Nicotiana tabacum HOM05D008056 ORTHO05D009804 6.0e-10 67.4 73 52.1
DCAR_008952 Daucus carota HOM05D008056 ORTHO05D009804 1.0e-09 66.6 82 53.7
Atru.chr12.2248 Acer truncatum HOM05D008056 ORTHO05D009804 1.3e-09 66.2 83 50.6
Oeu041070.2 Olea europaea HOM05D008056 ORTHO05D009804 1.3e-09 66.2 103 47.6
Oeu060999.1 Olea europaea HOM05D008056 ORTHO05D009804 1.3e-09 66.2 85 49.4
TWI39G0847 Tripterygium wilfordii HOM05D008056 ORTHO05D009804 1.3e-09 66.2 85 52.9
vmacro06398 Vaccinium macrocarpon HOM05D008056 ORTHO05D009804 2.3e-09 65.5 85 51.8
Haze_00233 Corylus avellana HOM05D008056 ORTHO05D009804 3.0e-09 65.1 84 53.6
Hma1.2p1_2994F.1_g331390 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 3.9e-09 64.7 83 53.0
Nitab4.5_0005491g0040 Nicotiana tabacum HOM05D008056 ORTHO05D009804 3.9e-09 64.7 85 48.2
CiPaw.06G044900 Carya illinoinensis HOM05D008056 ORTHO05D009804 5.1e-09 64.3 84 53.6
SalBow2G0413 Salvia bowleyana HOM05D008056 ORTHO05D009804 5.1e-09 64.3 84 45.2
CiPaw.05G198700 Carya illinoinensis HOM05D008056 ORTHO05D009804 1.1e-08 63.2 88 50.0
Peaxi162Scf00740g00228 Petunia axillaris HOM05D008056 ORTHO05D009804 1.1e-08 63.2 65 53.8
Glyma.04G233800 Glycine max HOM05D008056 ORTHO05D009804 4.3e-08 61.2 79 51.9
Solyc06g052020.2 Solanum lycopersicum HOM05D008056 ORTHO05D009804 4.3e-08 61.2 80 52.5
ECA232G3962 Erigeron canadensis HOM05D008056 ORTHO05D009804 5.6e-08 60.8 84 48.8
Rhsim09G0206700 Rhododendron simsii HOM05D008056 ORTHO05D009804 5.6e-08 60.8 83 48.2
Sabra12G0015100 Salix brachista HOM05D008056 ORTHO05D009804 7.3e-08 60.5 84 58.3
Sopen06g018070 Solanum pennellii HOM05D008056 ORTHO05D009804 7.3e-08 60.5 79 50.6
PGSC0003DMG400019598 Solanum tuberosum HOM05D008056 ORTHO05D009804 7.3e-08 60.5 82 47.6
PGSC0003DMG400018526 Solanum tuberosum HOM05D008056 ORTHO05D009804 9.6e-08 60.1 72 45.8
CAN.G312.7 Capsicum annuum HOM05D008056 ORTHO05D009804 1.2e-07 59.7 72 51.4
Migut.F01018 Erythranthe guttata HOM05D008056 ORTHO05D009804 1.6e-07 59.3 88 45.5
Solyc03g082945.1 Solanum lycopersicum HOM05D008056 ORTHO05D009804 2.1e-07 58.9 72 45.8
Sopen03g022760 Solanum pennellii HOM05D008056 ORTHO05D009804 2.8e-07 58.5 72 44.4
Migut.F00196 Erythranthe guttata HOM05D008056 ORTHO05D009804 4.7e-07 57.8 75 45.3
QL09p007938 Quercus lobata HOM05D008056 ORTHO05D009804 4.7e-07 57.8 70 50.0
Ciclev10023135m.g Citrus clementina HOM05D008056 ORTHO05D009804 6.2e-07 57.4 78 50.0
HanXRQChr09g0237881 Helianthus annuus HOM05D008056 ORTHO05D009804 1.1e-06 56.6 83 44.6
GSVIVG01029691001 Vitis vinifera HOM05D008056 ORTHO05D009804 1.1e-06 56.6 84 47.6
Lsat_1_v5_gn_9_49881 Lactuca sativa HOM05D008056 ORTHO05D009804 1.8e-06 55.8 79 45.6
Potri.015G010500 Populus trichocarpa HOM05D008056 ORTHO05D009804 1.8e-06 55.8 83 54.2
Cpa.g.sc3.104 Carica papaya HOM05D008056 ORTHO05D009804 2.4e-06 55.5 78 46.2


User provided reference genes

Program Settings