Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 7.9e-61 236.9 116 100.0
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 6.3e-42 174.1 119 70.6
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.4e-41 172.9 116 75.0
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.8e-41 172.6 116 74.1
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.5e-40 169.5 116 70.7
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 2.2e-39 165.6 116 71.6
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.1e-38 163.3 129 65.9
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 5.5e-38 161.0 116 65.5
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 2.1e-37 159.1 114 70.2
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 2.7e-37 158.7 114 66.7
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 4.7e-37 157.9 114 70.2
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 2.3e-36 155.6 114 70.2
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 3.9e-36 154.8 114 69.3
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 5.1e-36 154.5 114 64.9
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 5.1e-36 154.5 117 65.0
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 5.1e-36 154.5 126 64.3
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 2.6e-35 152.1 109 69.7
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 3.3e-35 151.8 116 65.5
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 3.3e-35 151.8 114 65.8
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 4.4e-35 151.4 114 67.5
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.4e-35 151.4 114 64.9
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 7.4e-35 150.6 114 64.9
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 2.2e-34 149.1 114 66.7
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 2.2e-34 149.1 83 83.1
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.2e-34 149.1 114 65.8
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 2.2e-34 149.1 114 65.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 2.8e-34 148.7 88 77.3
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 2.8e-34 148.7 116 66.4
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 3.7e-34 148.3 114 67.5
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 4.8e-34 147.9 113 65.5
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 4.8e-34 147.9 117 65.8
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 6.3e-34 147.5 83 77.1
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 6.3e-34 147.5 114 65.8
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 8.2e-34 147.1 105 69.5
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 8.2e-34 147.1 116 64.7
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.1e-33 146.7 115 66.1
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.1e-33 146.7 107 71.0
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.4e-33 146.4 114 65.8
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.4e-33 146.4 114 64.9
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.4e-33 146.4 98 73.5
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.4e-33 146.4 114 64.0
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.8e-33 146.0 118 60.2
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.8e-33 146.0 118 61.0
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.4e-33 145.6 114 68.4
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.4e-33 145.6 119 60.5
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 2.4e-33 145.6 114 64.0
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 3.1e-33 145.2 107 70.1
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 4.1e-33 144.8 118 61.0
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 5.3e-33 144.4 118 61.0
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 5.3e-33 144.4 137 57.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 5.3e-33 144.4 114 62.3
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 5.3e-33 144.4 114 66.7
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 7.0e-33 144.1 118 60.2
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 7.0e-33 144.1 81 79.0
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 7.0e-33 144.1 114 64.0
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 9.1e-33 143.7 118 60.2
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 9.1e-33 143.7 119 60.5
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 9.1e-33 143.7 116 65.5
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 9.1e-33 143.7 119 63.9
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 9.1e-33 143.7 114 62.3
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.5e-32 142.9 88 75.0
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.5e-32 142.9 88 75.0
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 1.5e-32 142.9 88 75.0
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 1.5e-32 142.9 112 64.3
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 1.5e-32 142.9 114 66.7
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.0e-32 142.5 114 62.3
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 2.0e-32 142.5 119 61.3
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.0e-32 142.5 98 71.4
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 2.0e-32 142.5 98 71.4
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 2.6e-32 142.1 116 62.9
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.6e-32 142.1 114 64.0
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 2.6e-32 142.1 114 63.2
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 3.5e-32 141.7 79 79.7
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 3.5e-32 141.7 114 64.0
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.5e-32 141.7 115 64.3
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 4.5e-32 141.4 119 60.5
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 4.5e-32 141.4 114 61.4
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.5e-32 141.4 114 63.2
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 5.9e-32 141.0 119 60.5
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 5.9e-32 141.0 114 62.3
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 5.9e-32 141.0 88 73.9
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 7.7e-32 140.6 114 62.3
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 7.7e-32 140.6 114 63.2
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.0e-31 140.2 120 59.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 1.0e-31 140.2 114 65.8
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.0e-31 140.2 114 61.4
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 1.3e-31 139.8 114 63.2
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.3e-31 139.8 110 63.6
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.2e-31 139.0 114 62.3
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 2.9e-31 138.7 116 61.2
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 3.8e-31 138.3 114 60.5
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 3.8e-31 138.3 114 60.5
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 5.0e-31 137.9 114 59.6
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 5.0e-31 137.9 114 63.2
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 5.0e-31 137.9 113 61.1
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 5.0e-31 137.9 68 88.2
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 6.1e-29 131.0 67 88.1
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 3.0e-28 128.6 101 65.3
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 2.0e-27 125.9 167 46.1
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 9.7e-27 123.6 67 80.6
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 9.7e-27 123.6 82 69.5
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 2.2e-26 122.5 116 53.4
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 6.3e-26 120.9 99 62.6
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.8e-25 119.4 107 55.1
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.8e-25 119.4 105 59.0
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.1e-25 118.6 63 82.5
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 3.1e-25 118.6 119 52.1
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.1e-25 118.2 66 83.3
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 7.7e-24 114.0 73 71.2
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.3e-23 113.2 60 86.7
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.5e-22 109.8 110 54.5
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.1e-21 105.9 113 54.9
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.4e-17 93.2 102 50.0
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.9e-14 82.8 84 53.6
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 1.2e-13 80.1 77 55.8
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 6.8e-12 74.3 76 57.9
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.0e-11 72.8 52 67.3
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.7e-10 69.7 60 56.7
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 5.9e-08 61.2 33 78.8
MCO07G580 Micromonas commoda HOM05D006678 ORTHO05D008388 5.5e-06 54.7 82 35.4


User provided reference genes

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