Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.1e-81 306.6 154 100.0
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 5.4e-41 171.4 122 67.2
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 9.2e-41 170.6 122 68.9
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 3.5e-40 168.7 122 67.2
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 6.0e-40 167.9 122 68.9
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 7.8e-40 167.5 127 65.4
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 7.8e-40 167.5 128 65.6
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.3e-39 166.8 127 65.4
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 1.7e-39 166.4 122 67.2
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 5.1e-39 164.9 120 67.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.5e-38 163.3 123 67.5
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.9e-38 162.9 122 65.6
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 2.5e-38 162.5 122 65.6
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.5e-38 162.5 122 66.4
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 3.3e-38 162.2 123 67.5
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 4.3e-38 161.8 125 67.2
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 4.3e-38 161.8 119 67.2
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 5.6e-38 161.4 127 63.8
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 7.3e-38 161.0 123 65.9
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 9.5e-38 160.6 122 66.4
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.2e-37 160.2 121 63.6
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.6e-37 159.8 122 65.6
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 1.6e-37 159.8 122 65.6
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.6e-37 159.8 122 64.8
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.6e-37 159.8 126 64.3
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.1e-37 159.5 128 61.7
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 2.1e-37 159.5 123 65.0
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.8e-37 159.1 128 64.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 3.6e-37 158.7 123 65.9
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 6.2e-37 157.9 123 63.4
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 8.1e-37 157.5 111 69.4
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.1e-36 157.1 128 64.8
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.1e-36 157.1 122 63.1
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.1e-36 157.1 120 65.0
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.4e-36 156.8 123 61.8
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.4e-36 156.8 122 64.8
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.4e-36 156.8 120 65.0
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.4e-36 156.8 123 65.9
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.8e-36 156.4 122 61.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.8e-36 156.4 122 64.8
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 2.3e-36 156.0 121 64.5
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 2.3e-36 156.0 123 65.0
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 3.1e-36 155.6 123 62.6
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 3.1e-36 155.6 122 60.7
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 3.1e-36 155.6 123 60.2
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 4.0e-36 155.2 117 62.4
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 4.0e-36 155.2 122 63.1
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 5.2e-36 154.8 117 62.4
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 5.2e-36 154.8 128 60.9
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 6.8e-36 154.5 122 60.7
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 6.8e-36 154.5 122 60.7
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 6.8e-36 154.5 122 60.7
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 6.8e-36 154.5 122 61.5
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 6.8e-36 154.5 122 64.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 8.9e-36 154.1 121 60.3
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 8.9e-36 154.1 122 63.1
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.6e-35 152.5 123 63.4
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 4.4e-35 151.8 121 59.5
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 5.8e-35 151.4 112 67.9
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 7.6e-35 151.0 122 62.3
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 9.9e-35 150.6 122 59.0
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.2e-34 149.4 111 68.5
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.9e-34 149.1 128 57.8
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 3.7e-34 148.7 121 63.6
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 6.4e-34 147.9 121 59.5
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 8.4e-34 147.5 122 62.3
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 8.4e-34 147.5 122 58.2
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.1e-33 147.1 122 59.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.9e-33 146.4 121 59.5
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 3.2e-33 145.6 122 59.8
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 4.1e-33 145.2 123 55.3
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 4.1e-33 145.2 122 59.0
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.2e-32 143.7 119 59.7
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.7e-32 142.5 155 53.5
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 4.6e-32 141.7 123 58.5
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 3.9e-31 138.7 116 62.1
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 5.1e-31 138.3 103 67.0
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 6.6e-31 137.9 143 51.0
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 4.3e-30 135.2 122 54.1
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 2.8e-29 132.5 122 57.4
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.7e-29 131.7 103 66.0
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 8.1e-29 131.0 104 61.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.4e-25 119.4 121 51.2
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 8.7e-23 110.9 83 68.7
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 3.3e-22 109.0 82 65.9
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.5e-19 100.1 83 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 7.6e-19 97.8 113 43.4
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 9.9e-19 97.4 113 45.1
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.4e-17 92.8 75 64.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 3.5e-16 89.0 75 60.0
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.1e-14 84.0 62 69.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 2.1e-13 79.7 109 42.2
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 3.4e-11 72.4 103 38.8
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.4e-09 66.2 93 43.0
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 4.3e-06 55.5 44 56.8


User provided reference genes

Program Settings