Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 8.7e-96 353.6 175 100.0
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.7e-46 188.7 171 56.1
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 7.0e-45 184.5 135 71.1
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 1.0e-43 180.6 153 62.1
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 2.3e-43 179.5 135 66.7
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 5.0e-43 178.3 113 77.0
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 5.0e-43 178.3 113 77.0
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.5e-42 176.8 122 70.5
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 2.5e-42 176.0 152 61.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 4.2e-42 175.3 120 70.0
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 5.6e-42 174.9 173 56.1
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 7.2e-42 174.5 179 53.6
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 7.2e-42 174.5 121 70.2
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 9.5e-42 174.1 109 77.1
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.6e-41 173.3 120 69.2
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 2.1e-41 172.9 133 65.4
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.8e-41 172.6 176 53.4
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.8e-41 172.6 176 53.4
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.6e-41 172.2 105 78.1
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 4.7e-41 171.8 138 61.6
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 4.7e-41 171.8 133 66.2
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 6.1e-41 171.4 137 62.8
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.8e-40 169.9 120 68.3
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.8e-40 169.9 129 64.3
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 2.3e-40 169.5 126 64.3
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 3.0e-40 169.1 120 68.3
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 3.0e-40 169.1 135 63.7
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 4.0e-40 168.7 119 69.7
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 5.2e-40 168.3 132 65.9
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 5.2e-40 168.3 118 71.2
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 6.8e-40 167.9 135 60.0
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 8.9e-40 167.5 114 73.7
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 8.9e-40 167.5 134 61.9
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 1.2e-39 167.2 128 62.5
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 1.2e-39 167.2 115 67.8
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 1.2e-39 167.2 134 61.9
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 1.5e-39 166.8 126 62.7
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 1.5e-39 166.8 113 69.9
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 1.5e-39 166.8 120 69.2
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.5e-39 166.8 120 69.2
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 1.5e-39 166.8 120 69.2
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 1.5e-39 166.8 174 53.4
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 2.0e-39 166.4 113 70.8
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 2.0e-39 166.4 172 53.5
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 3.4e-39 165.6 134 62.7
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 3.4e-39 165.6 136 62.5
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 3.4e-39 165.6 138 60.1
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 3.4e-39 165.6 129 62.8
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 3.4e-39 165.6 138 61.6
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 4.4e-39 165.2 109 70.6
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 5.7e-39 164.9 108 72.2
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 5.7e-39 164.9 122 64.8
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 5.7e-39 164.9 106 69.8
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 9.8e-39 164.1 146 58.2
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 9.8e-39 164.1 146 58.2
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 9.8e-39 164.1 126 61.1
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 9.8e-39 164.1 136 58.8
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 9.8e-39 164.1 120 65.8
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 9.8e-39 164.1 182 52.7
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 9.8e-39 164.1 113 68.1
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 1.3e-38 163.7 142 57.0
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.3e-38 163.7 146 58.9
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 1.3e-38 163.7 110 71.8
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 1.3e-38 163.7 106 72.6
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.3e-38 163.7 120 67.5
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 1.7e-38 163.3 130 61.5
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 1.7e-38 163.3 113 69.9
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.7e-38 163.3 127 59.8
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 2.2e-38 162.9 169 52.7
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.2e-38 162.9 105 75.2
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 2.2e-38 162.9 123 65.0
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 2.9e-38 162.5 146 58.2
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 2.9e-38 162.5 146 58.2
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 3.7e-38 162.2 111 71.2
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.4e-37 160.2 150 52.0
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 3.2e-37 159.1 131 63.4
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 3.2e-37 159.1 131 63.4
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 3.2e-37 159.1 131 63.4
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 4.1e-37 158.7 140 57.1
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 1.2e-36 157.1 120 63.3
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 1.2e-36 157.1 118 66.1
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 1.6e-36 156.8 113 66.4
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.6e-36 156.8 103 68.9
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 2.0e-36 156.4 183 49.2
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 3.5e-36 155.6 167 52.1
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 1.0e-35 154.1 109 65.1
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 1.3e-35 153.7 110 66.4
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 1.3e-35 153.7 112 67.9
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 2.9e-35 152.5 100 71.0
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 3.9e-35 152.1 110 63.6
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 5.0e-35 151.8 113 67.3
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 6.6e-35 151.4 104 68.3
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 1.6e-33 146.7 88 78.4
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 4.7e-33 145.2 87 78.2
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 6.2e-33 144.8 105 64.8
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 8.9e-32 141.0 101 64.4
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 4.4e-31 138.7 87 74.7
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.9e-30 135.2 90 70.0
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.4e-30 134.8 89 70.8
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 5.0e-27 125.2 110 52.7
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 5.0e-27 125.2 110 52.7
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 9.5e-26 120.9 105 52.4
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 9.5e-26 120.9 165 40.6
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 7.5e-23 111.3 110 48.2
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 6.0e-12 75.1 37 83.8


User provided reference genes

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