Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 6.9e-90 334.0 170 100.0
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 2.4e-42 176.0 137 64.2
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.7e-41 172.6 126 65.1
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 3.5e-41 172.2 126 63.5
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 4.6e-41 171.8 137 63.5
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 1.7e-40 169.9 125 64.0
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 5.0e-40 168.3 122 66.4
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.5e-39 166.8 115 66.1
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.9e-39 166.4 167 49.7
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-39 166.0 125 62.4
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-39 166.0 125 62.4
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.5e-39 166.0 125 62.4
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 3.3e-39 165.6 127 61.4
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 4.3e-39 165.2 124 64.5
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 5.6e-39 164.9 128 63.3
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.6e-39 164.9 135 60.0
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 7.3e-39 164.5 125 63.2
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.2e-38 163.7 124 63.7
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.2e-38 163.7 125 61.6
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.2e-38 163.7 123 62.6
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 3.6e-38 162.2 127 64.6
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 3.6e-38 162.2 137 54.0
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 6.2e-38 161.4 124 59.7
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 6.2e-38 161.4 124 59.7
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 1.1e-37 160.6 137 54.0
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.8e-37 159.8 129 60.5
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 1.8e-37 159.8 114 64.0
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 3.1e-37 159.1 129 58.9
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 3.1e-37 159.1 125 60.8
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 8.9e-37 157.5 118 65.3
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 1.5e-36 156.8 114 63.2
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 1.5e-36 156.8 124 61.3
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.5e-36 156.8 123 60.2
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 4.4e-36 155.2 128 57.0
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 7.5e-36 154.5 114 62.3
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.3e-35 153.7 128 57.8
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 1.3e-35 153.7 137 56.2
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 1.7e-35 153.3 131 52.7
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.7e-35 153.3 137 54.0
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 2.9e-35 152.5 117 63.2
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 2.9e-35 152.5 124 62.9
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.9e-35 152.5 139 53.2
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 2.9e-35 152.5 137 54.7
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-34 150.2 112 62.5
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.9e-34 149.8 137 54.0
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 2.4e-34 149.4 130 56.2
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 3.2e-34 149.1 111 62.2
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 4.1e-34 148.7 116 58.6
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.1e-34 148.7 114 58.8
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.1e-34 148.7 117 56.4
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.1e-34 148.7 117 56.4
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 5.4e-34 148.3 129 53.5
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 9.2e-34 147.5 109 61.5
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.2e-34 147.5 129 55.8
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.6e-33 146.7 131 54.2
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 2.1e-33 146.4 109 64.2
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.1e-33 146.4 129 51.9
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 4.6e-33 145.2 120 57.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 6.0e-33 144.8 111 58.6
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 3.9e-32 142.1 143 52.4
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.3e-31 137.9 131 51.9
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 7.3e-31 137.9 119 54.6
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.8e-30 136.0 133 51.9
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.0e-29 132.1 133 51.1
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.2e-28 130.6 135 49.6
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 7.6e-28 127.9 132 47.7
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 9.9e-28 127.5 112 50.9
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 3.5e-25 119.0 129 48.8
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.8e-25 117.9 114 51.8
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.3e-24 116.3 124 41.9
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 3.9e-24 115.5 131 47.3
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 8.6e-24 114.4 128 44.5
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 1.5e-23 113.6 114 50.9
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.5e-23 113.6 122 48.4
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 7.3e-23 111.3 101 53.5
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.6e-22 110.2 138 39.9
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.6e-22 110.2 125 45.6
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.6e-22 110.2 126 44.4
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.1e-21 107.5 105 50.5
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.1e-21 105.9 111 45.0
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.9e-21 104.4 127 41.7
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-20 104.0 115 42.6
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.6e-20 102.8 128 45.3
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 2.6e-20 102.8 116 49.1
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.4e-20 102.1 99 47.5
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 4.4e-20 102.1 124 39.5
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.3e-19 100.5 124 38.7
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.2e-18 95.9 137 37.2
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.2e-18 95.9 132 35.6
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 7.1e-18 94.7 124 37.9
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.1e-18 94.7 66 63.6
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.5e-17 92.4 137 35.8
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 1.0e-16 90.9 119 39.5
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.7e-16 90.1 137 37.2
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.0e-16 89.4 110 37.3
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.0e-16 89.4 125 40.8
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.9e-16 89.0 130 37.7
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.1e-16 88.6 93 47.3
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-15 87.4 114 42.1
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-15 86.7 82 50.0
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 3.3e-15 85.9 126 34.1
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.3e-15 85.5 133 36.1
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 7.3e-15 84.7 55 67.3
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.1e-14 83.2 111 38.7
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 9.0e-13 77.8 142 33.1
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.0e-13 77.8 125 32.8
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.5e-12 77.0 100 42.0
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.5e-12 75.5 143 32.2
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.8e-11 72.4 89 36.0
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-10 70.1 111 36.9
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 2.4e-10 69.7 134 29.9
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 2.4e-10 69.7 134 29.9
AagrBONN_evm.TU.Sc2ySwM_344.1663 Anthoceros agrestis HOM05D006839 ORTHO05D007872 5.4e-10 68.6 115 34.8
AagrBONN_evm.TU.Sc2ySwM_344.1661 Anthoceros agrestis HOM05D058811 ORTHO05D019592 6.0e-09 65.1 106 33.0
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 1.0e-08 64.3 142 30.3
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 1.8e-08 63.5 124 30.6
TAR627G0385 Trochodendron aralioides HOM05D000022 ORTHO05D000071 5.6e-07 58.5 88 34.1
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.3e-06 57.4 105 31.4
SEGI_36721 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.3e-06 57.4 97 28.9
Zm00001eb291380 Zea mays HOM05D000022 ORTHO05D000071 1.6e-06 57.0 72 37.5
Psat6g211880 Pisum sativum HOM05D000022 ORTHO05D000306 2.1e-06 56.6 87 35.6
VMungo0720G0418 Vigna mungo HOM05D000022 ORTHO05D000071 2.8e-06 56.2 122 32.0
COL.COLO4_30654 Corchorus olitorius HOM05D000022 ORTHO05D000306 3.7e-06 55.8 75 38.7
Duzib160G0834 Durio zibethinus HOM05D000022 ORTHO05D000071 3.7e-06 55.8 91 34.1
VMungo0720G3078 Vigna mungo HOM05D000022 ORTHO05D000306 4.8e-06 55.5 116 27.6
Manes.12G052300 Manihot esculenta HOM05D000022 ORTHO05D000306 6.2e-06 55.1 91 33.0
Potri.004G024900 Populus trichocarpa HOM05D000022 ORTHO05D000071 6.2e-06 55.1 108 31.5
Potri.004G025900 Populus trichocarpa HOM05D000022 ORTHO05D000071 6.2e-06 55.1 108 31.5
CSS0048814 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 8.1e-06 54.7 115 32.2
LjContig00408g0014473 Lotus japonicus HOM05D000022 ORTHO05D000071 8.1e-06 54.7 84 34.5


User provided reference genes

Program Settings