Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 2.5e-242 841.6 419 100.0
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 4.4e-186 654.8 419 77.8
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 7.5e-186 654.1 419 77.8
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 9.8e-186 653.7 419 77.3
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 1.3e-185 653.3 419 77.8
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.8e-184 649.4 424 76.9
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 3.1e-184 648.7 419 76.1
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 9.1e-184 647.1 419 76.1
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 1.2e-183 646.7 419 75.9
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 1.6e-183 646.4 419 76.6
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 2.7e-183 645.6 417 77.7
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 1.3e-182 643.3 415 77.1
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 1.3e-182 643.3 420 77.6
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 1.7e-182 642.9 419 76.8
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 2.9e-182 642.1 415 76.6
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 2.9e-182 642.1 419 77.3
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 2.9e-182 642.1 443 72.7
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 2.9e-182 642.1 419 75.4
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 3.8e-182 641.7 420 77.9
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 3.8e-182 641.7 417 77.5
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 8.5e-182 640.6 420 77.6
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 1.5e-181 639.8 417 76.5
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 1.5e-181 639.8 419 75.7
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 4.2e-181 638.3 420 76.2
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 1.6e-180 636.3 419 75.7
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 2.1e-180 636.0 420 77.1
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 6.1e-180 634.4 419 74.5
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 1.4e-179 633.3 420 76.7
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 1.8e-179 632.9 420 76.2
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 3.0e-179 632.1 419 73.0
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 4.0e-179 631.7 419 75.9
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 6.8e-179 630.9 421 77.0
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 6.8e-179 630.9 419 74.2
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 2.0e-178 629.4 419 75.7
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 4.4e-178 628.2 420 74.3
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 7.5e-178 627.5 419 74.0
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 9.8e-178 627.1 419 74.0
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 1.7e-177 626.3 419 74.0
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 2.2e-177 625.9 419 74.2
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 2.2e-177 625.9 419 72.6
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 2.8e-177 625.5 499 65.7
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 4.9e-177 624.8 419 71.6
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 8.3e-177 624.0 419 74.5
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 1.1e-176 623.6 419 74.5
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 1.4e-176 623.2 420 74.0
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 1.4e-176 623.2 419 73.7
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 1.8e-176 622.9 419 73.5
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 1.8e-176 622.9 449 71.3
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 3.1e-176 622.1 419 74.5
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 2.7e-175 619.0 451 70.7
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 3.5e-175 618.6 419 73.5
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 5.9e-175 617.8 419 74.0
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 5.9e-175 617.8 419 72.8
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 5.9e-175 617.8 419 71.8
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 7.8e-175 617.5 419 72.1
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 1.0e-174 617.1 416 71.9
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 2.3e-174 615.9 445 70.6
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 2.3e-174 615.9 419 73.0
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 2.9e-174 615.5 419 72.1
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 5.0e-174 614.8 419 71.4
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 5.0e-174 614.8 419 73.3
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 1.5e-173 613.2 411 75.2
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 4.3e-173 611.7 413 74.1
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 4.3e-173 611.7 412 73.8
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 7.3e-173 610.9 411 73.7
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 7.3e-173 610.9 412 74.0
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 7.3e-173 610.9 419 71.8
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 7.3e-173 610.9 419 71.8
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 9.5e-173 610.5 419 72.3
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 1.2e-172 610.1 419 72.6
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 1.6e-172 609.8 420 71.7
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 1.6e-172 609.8 412 74.0
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 2.1e-172 609.4 419 71.1
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 2.8e-172 609.0 412 73.5
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 3.6e-172 608.6 419 71.8
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 6.1e-172 607.8 419 71.8
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 6.1e-172 607.8 412 73.8
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 8.0e-172 607.4 412 73.5
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 1.0e-171 607.1 420 71.7
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 2.3e-171 605.9 391 76.2
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 3.0e-171 605.5 413 73.1
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 4.0e-171 605.1 571 57.4
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 5.2e-171 604.7 391 76.2
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 5.2e-171 604.7 407 74.2
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 6.8e-171 604.4 413 73.4
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 6.8e-171 604.4 420 70.7
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 6.8e-171 604.4 419 70.6
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 6.8e-171 604.4 419 70.6
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 1.5e-170 603.2 412 73.1
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 1.5e-170 603.2 412 73.1
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 2.0e-170 602.8 427 70.0
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 2.6e-170 602.4 411 73.0
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 4.4e-170 601.7 419 71.1
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 5.7e-170 601.3 412 72.8
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 1.3e-169 600.1 417 72.7
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 2.2e-169 599.4 411 72.7
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 2.9e-169 599.0 414 72.5
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 1.4e-168 596.7 409 72.6
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 1.4e-168 596.7 419 70.6
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 1.4e-168 596.7 412 72.3
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 3.2e-168 595.5 419 72.6
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 1.2e-167 593.6 407 73.0
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 1.6e-167 593.2 417 71.2
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 3.5e-167 592.0 379 76.3
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 3.5e-167 592.0 417 71.9
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 4.3e-165 585.1 381 75.6
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.4e-163 580.1 470 66.6
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 4.0e-163 578.6 413 70.2
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 4.4e-162 575.1 420 68.1
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 7.0e-160 567.8 415 69.6
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 7.5e-154 547.7 414 66.2
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 5.1e-150 535.0 372 72.8
CAN.G536.3 Capsicum annuum HOM05D000834 ORTHO05D006956 3.0e-142 509.2 318 80.5
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 1.5e-141 506.9 308 78.9
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 9.6e-141 504.2 346 74.0
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 1.1e-139 500.7 327 74.3
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 1.1e-133 480.7 302 76.8
SalBow6G5988 Salvia bowleyana HOM05D000834 ORTHO05D006956 5.6e-125 451.8 346 68.8
Zm00001eb258880 Zea mays HOM05D000834 ORTHO05D006956 4.2e-120 435.6 299 74.9
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 5.6e-117 425.2 411 54.5
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 1.3e-116 424.1 405 55.1
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 4.5e-114 415.6 376 52.7
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 7.4e-109 398.3 360 52.5
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 6.9e-99 365.2 373 50.4
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 7.4e-93 345.1 239 74.9
MD15G1374200 Malus domestica HOM05D000834 ORTHO05D006956 7.7e-82 308.5 242 63.6
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 1.3e-81 307.8 300 48.7
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 1.4e-75 287.7 360 43.6
PRCOL_00005891 Prasinoderma coloniale HOM05D000834 ORTHO05D006956 2.2e-68 263.8 412 36.4
Dinv43064 Davidia involucrata HOM05D000834 ORTHO05D006956 3.0e-62 243.4 252 55.6
Cre10.g434450 Chlamydomonas reinhardtii HOM05D000834 ORTHO05D006956 2.2e-60 237.3 364 39.3
SHI26743 Sapria himalayana HOM05D000834 ORTHO05D006956 1.1e-59 235.0 214 61.2
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 3.8e-57 226.5 267 50.2
SEGI_20632 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.2e-53 214.9 171 67.3
Gohir.A13G077301 Gossypium hirsutum HOM05D000834 ORTHO05D006956 1.1e-43 181.8 99 89.9
Gohir.A12G044900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 5.6e-32 142.9 80 85.0
Gohir.A01G059200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 9.5e-32 142.1 82 84.1
vmacro08769 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 1.4e-30 138.3 132 56.8
CDE02G0223 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.4e-27 127.5 81 74.1
vmacro08768 Vaccinium macrocarpon HOM05D000834 ORTHO05D426596 4.4e-21 106.7 62 75.8
SHI26740 Sapria himalayana HOM05D000834 ORTHO05D006956 1.3e-20 105.1 105 50.5
BcaB02g11316 Brassica carinata HOM05D000834 ORTHO05D000693 1.2e-18 98.6 76 61.8
Lsat_1_v5_gn_8_148040 Lactuca sativa HOM05D000834 ORTHO05D006956 8.4e-12 75.9 64 59.4
CiPaw.05G147100 Carya illinoinensis HOM05D000834 ORTHO05D006956 6.7e-09 66.2 42 78.6
Lsat_1_v5_gn_7_90061 Lactuca sativa HOM05D000834 ORTHO05D001119 1.9e-08 64.7 48 68.8
C09p57810 Brassica napus HOM05D006883 ORTHO05D008624 6.2e-07 59.7 263 23.2
A10p20920 Brassica napus HOM05D006883 ORTHO05D008624 5.3e-06 56.6 264 23.5
BraA10t44156Z Brassica rapa HOM05D006883 ORTHO05D008624 9.0e-06 55.8 264 23.1
Lalb_Chr15g0087031 Lupinus albus HOM05D006883 ORTHO05D008624 9.0e-06 55.8 256 23.8


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