Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g17180 Coffea canephora HOM05D008225 ORTHO05D009677 7.0e-58 227.3 130 100.0
Oeu004051.1 Olea europaea HOM05D008225 ORTHO05D009677 5.2e-21 104.8 132 53.0
Oeu022260.2 Olea europaea HOM05D008225 ORTHO05D009677 5.2e-21 104.8 133 51.9
GSVIVG01028623001 Vitis vinifera HOM05D008225 ORTHO05D009677 1.5e-20 103.2 131 52.7
CiPaw.03G150800 Carya illinoinensis HOM05D008225 ORTHO05D009677 8.4e-19 97.4 140 44.3
Cfa002561 Carpinus fangiana HOM05D008225 ORTHO05D009677 3.2e-18 95.5 136 44.9
Hma1.2p1_1061F.1_g253430 Hydrangea macrophylla HOM05D008225 ORTHO05D009677 4.2e-18 95.1 137 46.7
CiPaw.04G106100 Carya illinoinensis HOM05D008225 ORTHO05D009677 3.0e-16 89.0 135 43.0
Nn1g07812 Nelumbo nucifera HOM05D008225 ORTHO05D009677 3.0e-16 89.0 133 48.1
Duzib138G0496 Durio zibethinus HOM05D008225 ORTHO05D009677 5.6e-15 84.7 140 46.4
Lalb_Chr01g0022391 Lupinus albus HOM05D008225 ORTHO05D009677 7.3e-15 84.3 133 45.1
Phvul.008G124100 Phaseolus vulgaris HOM05D008225 ORTHO05D009677 9.6e-15 84.0 133 45.9
Oeu015897.1 Olea europaea HOM05D008225 ORTHO05D009677 1.6e-14 83.2 132 45.5
PGR044G2397 Punica granatum HOM05D008225 ORTHO05D009677 8.1e-14 80.9 129 40.3
Lalb_Chr03g0041841 Lupinus albus HOM05D008225 ORTHO05D009677 1.8e-13 79.7 133 42.1
TAR365G0517 Trochodendron aralioides HOM05D008225 ORTHO05D009677 5.3e-13 78.2 129 41.9
Glyma.08G355400 Glycine max HOM05D008225 ORTHO05D009677 9.0e-13 77.4 137 42.3
Prupe.8G204100 Prunus persica HOM05D008225 ORTHO05D009677 9.0e-13 77.4 138 40.6
RcHm_v2.0_Chr6g0285001 Rosa chinensis HOM05D008225 ORTHO05D009677 9.0e-13 77.4 131 41.2
Lsat_1_v5_gn_5_179960 Lactuca sativa HOM05D008225 ORTHO05D009677 1.2e-12 77.0 135 40.7
Potri.002G241300 Populus trichocarpa HOM05D008225 ORTHO05D009677 1.5e-12 76.6 140 42.1
Glyma.18G171800 Glycine max HOM05D008225 ORTHO05D009677 3.4e-12 75.5 133 43.6
Thecc.01G227200 Theobroma cacao HOM05D008225 ORTHO05D009677 9.9e-12 73.9 141 42.6
Eucgr.K03609 Eucalyptus grandis HOM05D008225 ORTHO05D009677 3.8e-11 72.0 146 41.8
Aqoxy5G00069 Aquilegia oxysepala HOM05D008225 ORTHO05D009677 1.1e-10 70.5 139 38.1
Duzib211G0631 Durio zibethinus HOM05D008225 ORTHO05D009677 1.9e-10 69.7 139 38.8
Gohir.A07G156400 Gossypium hirsutum HOM05D008225 ORTHO05D009677 2.4e-10 69.3 137 40.1
Gohir.D07G162700 Gossypium hirsutum HOM05D008225 ORTHO05D009677 5.4e-10 68.2 137 40.1
Gohir.D08G211900 Gossypium hirsutum HOM05D008225 ORTHO05D009677 5.4e-10 68.2 142 39.4
Gorai.001G186300 Gossypium raimondii HOM05D008225 ORTHO05D009677 5.4e-10 68.2 137 40.1
Gorai.004G225300 Gossypium raimondii HOM05D008225 ORTHO05D009677 5.4e-10 68.2 142 39.4
Gohir.A08G194100 Gossypium hirsutum HOM05D008225 ORTHO05D009677 7.1e-10 67.8 143 39.2
MSTRG.21427 Avicennia marina HOM05D008225 ORTHO05D009677 1.2e-09 67.0 136 40.4
FvH4_2g19210 Fragaria vesca HOM05D008225 ORTHO05D009677 1.2e-09 67.0 130 35.4
Manes.12G052002 Manihot esculenta HOM05D008225 ORTHO05D009677 2.1e-09 66.2 132 37.1
TPR.G15287 Trifolium pratense HOM05D008225 ORTHO05D009677 3.5e-09 65.5 129 33.3
Medtr7g058790 Medicago truncatula HOM05D008225 ORTHO05D009677 4.6e-09 65.1 129 39.5
VMungo1383G1963 Vigna mungo HOM05D008225 ORTHO05D009677 6.0e-09 64.7 118 44.9
Lj1g0012566 Lotus japonicus HOM05D008225 ORTHO05D009677 7.8e-09 64.3 130 38.5
Dinv04656 Davidia involucrata HOM05D002283 ORTHO05D005725 1.0e-08 63.9 113 40.7
MSTRG.18385 Avicennia marina HOM05D008225 ORTHO05D009677 1.7e-08 63.2 113 39.8
TAR636G1462 Trochodendron aralioides HOM05D008225 ORTHO05D009677 1.7e-08 63.2 117 37.6
FAN15G1086 Fragaria x ananassa HOM05D008225 ORTHO05D009677 2.3e-08 62.8 130 34.6
MSTRG.12494 Avicennia marina HOM05D008225 ORTHO05D009677 6.6e-08 61.2 111 41.4
QL09p054716 Quercus lobata HOM05D008225 ORTHO05D009677 6.6e-08 61.2 120 46.7
Actinidia30086 Actinidia chinensis HOM05D008225 ORTHO05D009677 1.5e-07 60.1 111 43.2
Sc05g0002450 Simmondsia chinensis HOM05D008225 ORTHO05D009677 1.5e-07 60.1 136 37.5
TAR362G0724 Trochodendron aralioides HOM05D008225 ORTHO05D009677 1.9e-07 59.7 111 46.8
AUR62031843 Chenopodium quinoa HOM05D034780 ORTHO05D009677 3.3e-07 58.9 116 44.0
SGA_v2.0_scaffold1G00723 Striga asiatica HOM05D008225 ORTHO05D009677 1.6e-06 56.6 142 37.3
AUR62008868 Chenopodium quinoa HOM05D034780 ORTHO05D009677 2.8e-06 55.8 108 40.7
Solyc09g061410.1 Solanum lycopersicum HOM05D028683 ORTHO05D009677 2.8e-06 55.8 134 40.3
TWI36G1499 Tripterygium wilfordii HOM05D008225 ORTHO05D009677 2.8e-06 55.8 132 35.6
PSO674G0048 Papaver somniferum HOM05D008225 ORTHO05D009677 4.8e-06 55.1 165 32.7


User provided reference genes

Program Settings