Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.2e-235 818.5 403 100.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.7e-124 449.5 426 54.7
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 1.5e-119 433.7 406 55.9
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 2.6e-119 433.0 317 67.8
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 5.8e-119 431.8 408 56.6
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 5.8e-119 431.8 408 56.1
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 2.2e-118 429.9 410 53.9
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 6.4e-118 428.3 405 55.3
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 5.4e-117 425.2 424 53.8
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 9.3e-117 424.5 447 53.9
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 6.0e-116 421.8 452 54.0
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 7.8e-116 421.4 401 56.4
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.0e-115 421.0 427 53.4
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 3.0e-115 419.5 401 55.4
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.5e-114 416.4 408 54.7
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 2.5e-114 416.4 402 54.2
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 4.3e-114 415.6 407 55.3
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 5.6e-114 415.2 437 52.6
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 7.3e-114 414.8 407 54.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 3.6e-113 412.5 455 51.0
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 4.8e-113 412.1 401 53.4
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 6.2e-113 411.8 409 54.8
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.4e-112 410.6 408 54.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.4e-112 410.6 401 54.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.8e-112 410.2 401 52.6
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 4.0e-112 409.1 401 52.4
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 4.0e-112 409.1 413 52.5
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 2.6e-111 406.4 448 51.6
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 5.8e-111 405.2 405 53.6
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 9.9e-111 404.4 409 52.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.3e-110 404.1 271 70.1
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.2e-110 403.3 407 53.1
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.9e-110 402.9 418 54.3
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 3.8e-110 402.5 407 53.3
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.8e-110 402.5 345 58.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.8e-110 402.5 413 54.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 3.8e-110 402.5 409 53.5
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 3.8e-110 402.5 401 52.4
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.4e-109 400.6 362 58.3
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.4e-109 400.6 362 57.7
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.9e-109 400.2 272 69.5
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 7.1e-109 398.3 411 53.3
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.2e-108 397.5 402 52.5
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.7e-108 396.4 421 52.5
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 3.5e-108 396.0 404 53.5
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 6.0e-108 395.2 406 51.0
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 3.0e-107 392.9 419 53.2
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 5.1e-107 392.1 407 54.3
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 8.7e-107 391.3 408 52.5
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 8.7e-107 391.3 354 58.2
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.1e-106 391.0 409 53.1
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 3.3e-106 389.4 278 66.9
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 4.8e-105 385.6 403 52.6
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 6.2e-105 385.2 413 51.1
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 6.9e-104 381.7 373 54.2
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.2e-103 380.9 394 52.3
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.8e-103 378.6 364 54.4
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 8.4e-102 374.8 363 54.8
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 6.0e-100 368.6 402 50.5
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.3e-99 367.5 360 53.3
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.3e-99 366.7 287 60.3
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 3.0e-99 366.3 431 48.3
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 6.7e-99 365.2 383 50.4
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.5e-98 363.2 283 61.8
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 2.5e-98 363.2 347 53.9
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.5e-98 363.2 329 54.4
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.3e-98 362.8 413 49.2
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 7.4e-98 361.7 352 55.4
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 3.7e-97 359.4 382 50.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 6.2e-97 358.6 304 57.9
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 6.2e-97 358.6 304 57.9
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.2e-97 358.2 284 61.3
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 8.2e-97 358.2 284 61.3
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 9.0e-96 354.8 344 53.2
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.5e-95 354.0 409 48.9
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 2.6e-95 353.2 260 65.0
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 4.5e-95 352.4 309 57.0
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 2.2e-94 350.1 410 50.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.3e-86 324.3 371 49.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.4e-85 320.9 408 43.9
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 2.7e-84 316.6 270 57.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 7.4e-82 308.5 411 43.1
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.2e-81 307.0 181 79.6
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 2.6e-79 300.1 313 53.4
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 6.5e-78 295.4 460 43.5
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 5.5e-77 292.4 187 73.3
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 1.0e-75 288.1 407 44.2
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.2e-70 270.4 319 49.2
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.9e-70 270.0 306 46.4
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 2.1e-68 263.8 257 52.1
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.3e-65 254.6 310 46.5
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 6.3e-65 252.3 337 44.5
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.7e-60 236.1 220 53.2
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 6.1e-60 235.7 320 43.1
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 4.8e-57 226.1 385 41.0
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 4.1e-56 223.0 295 44.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 2.0e-55 220.7 407 36.9
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 8.5e-54 215.3 275 45.1
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.2e-52 211.5 179 60.9
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.0e-51 206.5 160 60.6
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 5.0e-46 189.5 247 42.5
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 1.2e-44 184.9 370 33.5
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 3.0e-43 180.3 122 70.5
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 3.3e-37 160.2 91 79.1
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.4e-34 150.2 256 39.5
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 1.2e-31 141.7 286 33.6
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 5.6e-29 132.9 120 55.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 8.0e-28 129.0 96 62.5
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.1e-27 128.6 93 64.5
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.2e-26 125.2 229 39.3
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.7e-25 121.3 305 30.8
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 5.4e-24 116.3 134 44.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.2e-18 98.6 93 47.3
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.9e-16 91.3 147 39.5
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.6e-15 86.7 138 39.1
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 2.8e-12 77.4 58 63.8
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 8.1e-12 75.9 47 70.2
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.0e-06 58.9 189 27.5


User provided reference genes

Program Settings