Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 0.0e+00 1191.8 618 100.0
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 2.5e-310 1068.1 617 88.0
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 2.1e-306 1055.0 616 87.3
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 5.8e-304 1047.0 640 83.4
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 7.6e-304 1046.6 617 86.5
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 1.0e-303 1046.2 616 86.2
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 2.2e-303 1045.0 614 87.1
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 1.9e-302 1042.0 616 85.7
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 2.7e-301 1038.1 617 85.9
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 8.7e-300 1033.1 617 85.4
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 8.7e-300 1033.1 614 84.2
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 1.5e-299 1032.3 617 85.4
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 1.3e-298 1029.2 617 84.9
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 1.6e-298 1028.9 614 84.5
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 2.1e-298 1028.5 617 85.1
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 4.8e-298 1027.3 617 84.6
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 8.2e-298 1026.5 616 84.1
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 8.2e-298 1026.5 617 84.3
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 8.2e-298 1026.5 616 84.3
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 1.4e-297 1025.8 616 84.1
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 1.8e-297 1025.4 655 81.4
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 2.4e-297 1025.0 617 84.3
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 3.1e-297 1024.6 617 84.3
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 4.1e-297 1024.2 616 84.6
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 5.3e-297 1023.8 617 84.8
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 1.2e-296 1022.7 616 84.9
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 2.6e-296 1021.5 617 84.6
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 3.8e-295 1017.7 620 83.7
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 3.8e-295 1017.7 616 83.9
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 3.2e-294 1014.6 617 83.3
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 5.5e-294 1013.8 616 83.8
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 5.5e-294 1013.8 616 83.6
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.2e-293 1012.7 617 84.0
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 2.7e-293 1011.5 616 82.8
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 1.8e-292 1008.8 616 82.1
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 3.9e-292 1007.7 617 83.0
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.9e-291 1005.4 623 81.7
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 4.3e-291 1004.2 616 82.5
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 9.1e-289 996.5 627 80.9
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 3.4e-288 994.6 614 81.4
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 7.7e-288 993.4 617 82.0
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 1.0e-287 993.0 616 81.5
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 1.0e-287 993.0 752 71.1
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 1.3e-287 992.6 614 81.1
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 1.6e-285 985.7 608 81.2
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 6.1e-285 983.8 643 78.4
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.1e-283 979.5 614 82.1
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 1.5e-283 979.2 615 80.3
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 2.6e-283 978.4 615 80.2
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 2.6e-283 978.4 615 80.0
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 2.6e-283 978.4 609 80.8
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 3.3e-283 978.0 615 80.5
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 1.7e-282 975.7 617 80.7
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 1.7e-282 975.7 617 80.6
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 2.2e-282 975.3 615 79.2
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 3.7e-282 974.5 615 79.0
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 6.3e-282 973.8 683 75.3
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 1.1e-281 973.0 615 79.8
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 5.3e-281 970.7 618 79.4
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 1.0e-279 966.5 615 79.3
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 1.0e-279 966.5 615 79.5
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 1.0e-279 966.5 616 79.5
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 3.8e-279 964.5 613 80.3
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 5.0e-279 964.1 616 79.5
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 1.4e-278 962.6 617 78.6
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 1.4e-278 962.6 617 78.6
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 1.9e-278 962.2 614 79.2
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 1.2e-277 959.5 622 78.5
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 2.7e-277 958.4 648 76.1
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 1.4e-276 956.1 617 79.3
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 3.0e-276 954.9 573 84.5
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 8.8e-276 953.4 615 79.2
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 4.4e-275 951.0 615 78.5
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 1.7e-274 949.1 616 78.4
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 4.8e-274 947.6 627 76.7
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 3.1e-273 944.9 598 79.6
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 5.3e-273 944.1 613 78.1
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 1.2e-272 943.0 621 77.1
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 2.1e-269 932.2 600 78.8
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 1.2e-267 926.4 540 85.9
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 8.2e-266 920.2 632 75.8
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 1.4e-265 919.5 614 75.6
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 6.5e-263 910.6 616 76.1
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 1.3e-258 896.3 581 78.3
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 8.3e-258 893.6 614 73.6
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 7.2e-254 880.6 641 71.6
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 3.5e-248 861.7 515 83.7
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 3.3e-246 855.1 575 76.5
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 9.5e-246 853.6 515 82.3
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 8.9e-244 847.0 622 72.0
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 1.3e-242 843.2 614 71.5
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 9.2e-241 837.0 513 83.6
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 5.0e-239 831.2 615 68.5
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 1.6e-224 783.1 467 83.9
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 2.7e-224 782.3 557 75.2
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 1.4e-220 770.0 614 62.1
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 9.9e-219 763.8 446 86.3
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 1.3e-210 736.9 619 60.3
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 5.1e-207 724.9 556 69.6
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 4.6e-200 701.8 614 57.7
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 4.3e-182 642.1 648 51.9
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 9.1e-172 607.8 361 86.4
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 1.5e-163 580.5 615 50.6
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 6.5e-162 575.1 360 82.2
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 8.0e-160 568.2 342 86.0
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 3.0e-159 566.2 494 65.4
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 1.0e-151 541.2 615 47.6
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 2.9e-146 523.1 391 70.6
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 1.6e-139 500.7 363 69.1
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 4.1e-124 449.5 522 45.8
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 2.0e-123 447.2 597 45.1
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 3.7e-117 426.4 284 79.2
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 1.9e-113 414.1 371 63.9
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 7.3e-105 385.6 457 52.5
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.6e-75 288.1 174 82.8
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 3.9e-74 283.5 170 84.1
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 5.8e-70 269.6 186 71.0
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.4e-60 238.4 152 81.6
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 6.1e-59 233.0 144 83.3
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 9.7e-57 225.7 134 82.8
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 1.4e-50 205.3 116 84.5
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 5.9e-46 189.9 150 66.7
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 2.2e-45 188.0 122 77.9
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 3.8e-45 187.2 104 80.8
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 8.5e-45 186.0 135 68.1
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 3.6e-43 180.6 109 78.9
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 7.0e-39 166.4 105 83.8
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 3.8e-37 160.6 177 51.4
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 2.4e-31 141.4 86 84.9
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 1.1e-28 132.5 138 56.5
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 1.5e-25 122.1 74 85.1
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 4.4e-25 120.6 106 53.8
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 4.4e-25 120.6 83 74.7
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 7.0e-23 113.2 58 82.8
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 7.0e-23 113.2 58 82.8
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 1.5e-20 105.5 57 80.7
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 1.0e-18 99.4 58 74.1
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 1.0e-18 99.4 58 74.1
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 2.3e-18 98.2 117 55.6
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 7.5e-17 93.2 50 84.0
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 2.9e-16 91.3 55 70.9
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 8.3e-16 89.7 54 79.6
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 8.3e-16 89.7 76 63.2
TAR375G0464 Trochodendron aralioides HOM05D004954 ORTHO05D006267 8.0e-11 73.2 42 78.6
MD05G1162500 Malus domestica HOM05D004954 ORTHO05D006267 1.4e-10 72.4 80 50.0
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 2.0e-09 68.6 61 65.6
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 2.0e-09 68.6 44 59.1
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 2.9e-08 64.7 40 67.5
QL09p053081 Quercus lobata HOM05D002786 ORTHO05D030058 7.0e-07 60.1 54 63.0
Hma1.2p1_0717F.1_g208260 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 7.8e-06 56.6 34 79.4


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