Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.2e-154 549.7 263 100.0
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.4e-94 350.1 259 65.3
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 1.2e-93 347.1 263 62.4
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 4.5e-88 328.6 264 60.6
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.9e-86 323.2 263 60.5
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 3.6e-85 318.9 266 59.0
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.0e-84 317.4 269 58.4
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 8.8e-84 314.3 263 57.8
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 3.3e-83 312.4 253 58.9
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 3.3e-83 312.4 253 58.9
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 6.3e-82 308.1 249 59.4
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 6.3e-82 308.1 263 57.4
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.4e-81 307.0 253 60.1
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.8e-81 306.6 254 58.7
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 7.0e-81 304.7 262 56.1
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 9.1e-81 304.3 263 57.0
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 9.1e-81 304.3 253 58.5
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.6e-80 303.5 263 55.1
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 4.5e-80 302.0 253 56.5
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.0e-79 300.8 249 57.8
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.3e-79 300.4 263 57.0
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 3.8e-79 298.9 255 58.4
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 6.5e-79 298.1 253 59.7
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 8.5e-79 297.7 267 57.3
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 2.5e-78 296.2 268 56.7
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 5.5e-78 295.0 249 57.4
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 1.2e-77 293.9 249 57.4
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.0e-76 290.8 254 56.3
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.0e-76 290.8 258 59.3
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 3.0e-76 289.3 232 60.8
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 3.0e-76 289.3 264 55.3
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 6.8e-76 288.1 267 54.3
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 6.8e-76 288.1 255 55.7
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.5e-75 287.0 253 55.7
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 2.0e-75 286.6 261 54.4
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.4e-73 280.4 306 48.0
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 2.7e-72 276.2 240 57.9
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-70 270.8 262 53.1
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.5e-70 270.4 259 53.3
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.9e-70 270.0 262 53.1
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 3.2e-70 269.2 254 52.8
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 7.2e-70 268.1 254 52.8
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 9.5e-70 267.7 263 53.2
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 5.2e-68 261.9 265 50.9
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 2.6e-67 259.6 271 49.8
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 3.4e-67 259.2 232 56.9
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 2.8e-66 256.1 271 48.0
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 4.9e-66 255.4 364 39.3
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 6.3e-66 255.0 248 51.2
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.4e-65 253.8 268 48.9
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 4.1e-65 252.3 249 50.6
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 5.4e-65 251.9 252 52.4
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.3e-63 247.3 263 48.3
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 1.7e-63 246.9 246 51.2
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.7e-63 246.9 249 50.6
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 2.3e-63 246.5 251 50.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 3.8e-63 245.7 246 51.2
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 5.0e-63 245.4 249 51.4
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 6.6e-63 245.0 202 57.4
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 8.6e-63 244.6 271 46.9
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.5e-62 243.8 250 50.0
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.5e-62 243.0 263 47.9
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 9.5e-62 241.1 178 64.0
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.6e-61 240.4 241 50.6
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.6e-61 240.4 249 48.2
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 8.0e-61 238.0 249 49.4
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 8.0e-61 238.0 249 49.8
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.8e-60 236.9 237 46.4
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 8.9e-60 234.6 200 59.5
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 4.4e-59 232.3 251 46.2
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 4.4e-59 232.3 329 41.6
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 1.3e-58 230.7 249 47.4
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 1.3e-58 230.7 249 47.4
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 1.3e-58 230.7 249 47.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.3e-58 230.7 199 59.3
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 2.2e-58 229.9 187 58.8
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 3.2e-57 226.1 260 46.2
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.7e-56 223.0 240 49.2
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 8.6e-55 218.0 285 42.5
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 5.6e-54 215.3 246 44.7
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 2.3e-52 209.9 255 47.5
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.5e-51 207.2 236 46.6
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 8.3e-50 201.4 179 52.5
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 2.4e-49 199.9 241 44.8
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 4.1e-49 199.1 253 43.5
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 4.6e-48 195.7 238 45.8
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 3.0e-47 193.0 238 44.5
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 4.7e-45 185.7 141 61.0
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 5.8e-43 178.7 256 41.4
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 6.4e-42 175.3 198 45.5
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.8e-36 157.1 238 39.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 7.1e-33 145.2 159 48.4
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 7.3e-30 135.2 110 60.9
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.7e-26 124.0 249 34.9
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 4.9e-26 122.5 266 33.1
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.4e-25 120.9 161 41.0
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 2.5e-22 110.2 200 31.5
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 7.3e-22 108.6 203 36.0
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.5e-19 100.9 135 39.3
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 2.6e-19 100.1 248 31.5
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 8.4e-18 95.1 168 33.3
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 5.4e-17 92.4 78 59.0
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.9e-14 84.0 246 29.3
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 1.2e-11 74.7 130 33.8


User provided reference genes

Program Settings