Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 1.5e-175 619.4 308 100.0
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 2.5e-138 495.7 304 76.6
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 3.3e-138 495.4 300 79.0
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 3.1e-136 488.8 301 77.1
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 3.7e-134 481.9 304 75.0
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 6.4e-134 481.1 301 77.7
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 5.4e-133 478.0 299 75.9
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 4.6e-132 474.9 301 74.1
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 1.0e-131 473.8 300 76.0
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 5.0e-131 471.5 300 75.7
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 9.5e-130 467.2 306 72.2
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 2.8e-129 465.7 299 72.9
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 1.2e-127 460.3 345 66.1
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 2.6e-127 459.1 300 72.3
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 2.9e-126 455.7 301 72.8
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 1.4e-125 453.4 301 72.1
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 1.9e-125 453.0 300 71.0
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 2.4e-125 452.6 311 69.5
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 4.1e-125 451.8 311 69.5
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 5.4e-125 451.4 301 71.8
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 5.4e-125 451.4 300 70.3
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 7.1e-125 451.1 304 71.1
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 7.1e-125 451.1 299 72.2
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 7.1e-125 451.1 299 71.6
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 2.7e-124 449.1 301 70.4
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 1.3e-123 446.8 310 69.0
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 5.1e-123 444.9 301 71.8
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 1.5e-122 443.4 299 71.2
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 9.5e-122 440.7 299 70.2
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 3.6e-121 438.7 299 69.2
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 8.1e-121 437.6 301 70.8
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 1.1e-120 437.2 299 70.6
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 3.1e-120 435.6 305 69.2
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 5.2e-120 434.9 305 69.2
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 5.2e-120 434.9 305 69.2
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 6.8e-120 434.5 299 68.2
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 6.8e-120 434.5 305 69.2
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 2.0e-119 433.0 305 68.9
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 2.0e-119 433.0 305 68.9
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 7.6e-119 431.0 299 68.2
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 4.9e-118 428.3 297 68.0
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 8.4e-118 427.6 304 68.4
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 3.2e-117 425.6 302 67.2
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 3.2e-117 425.6 297 67.0
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 4.6e-116 421.8 299 67.2
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 2.3e-115 419.5 304 66.1
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 3.9e-115 418.7 272 73.2
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 1.5e-114 416.8 306 65.0
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 1.5e-114 416.8 314 65.6
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 1.6e-113 413.3 304 66.4
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 1.6e-113 413.3 306 65.0
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 2.1e-113 412.9 253 73.9
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 1.1e-112 410.6 297 66.3
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 1.1e-112 410.6 290 67.2
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 1.8e-112 409.8 299 66.6
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 4.0e-112 408.7 300 68.3
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 9.0e-112 407.5 297 65.7
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 2.1e-108 396.4 306 60.8
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 2.1e-108 396.4 308 64.0
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 7.8e-108 394.4 311 63.0
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 3.0e-107 392.5 304 63.8
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 1.1e-106 390.6 309 63.8
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 1.5e-106 390.2 309 62.1
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 5.6e-106 388.3 299 65.6
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 2.6e-103 379.4 376 52.9
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 2.3e-99 366.3 297 57.9
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 2.5e-98 362.8 303 59.4
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 2.5e-98 362.8 292 62.7
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 3.3e-98 362.5 292 62.3
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 7.4e-98 361.3 297 57.6
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 3.7e-97 359.0 304 55.3
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 8.1e-97 357.8 297 56.2
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 1.1e-96 357.5 297 56.6
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 1.4e-96 357.1 254 65.7
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 6.9e-96 354.8 297 56.2
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 9.0e-96 354.4 297 55.9
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 9.0e-96 354.4 297 55.9
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 9.0e-96 354.4 297 55.9
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 2.0e-95 353.2 295 56.6
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.9e-94 349.4 300 55.7
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 6.4e-94 348.2 304 54.3
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 6.4e-94 348.2 304 54.3
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 1.4e-93 347.1 300 55.3
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 4.3e-90 335.5 226 70.4
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 6.9e-88 328.2 255 60.8
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 9.0e-88 327.8 314 53.2
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 6.3e-81 305.1 308 50.3
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 1.4e-80 303.9 308 50.0
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 4.1e-80 302.4 300 51.3
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 1.7e-78 297.0 278 54.3
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 6.7e-75 285.0 262 52.3
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 1.5e-74 283.9 259 53.7
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 9.7e-74 281.2 284 51.4
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 8.2e-65 251.5 303 45.9
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 8.2e-65 251.5 243 54.3
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 1.6e-55 220.7 249 45.0
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 5.0e-54 215.7 179 58.7
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 9.4e-53 211.5 312 39.4
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 3.1e-48 196.4 132 69.7
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 5.3e-48 195.7 131 70.2
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 1.3e-46 191.0 137 65.0
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 1.6e-44 184.1 140 62.1
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 4.7e-44 182.6 150 56.0
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 3.4e-42 176.4 138 58.0
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 2.9e-25 120.2 82 65.9
SEGI_41332 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 1.6e-23 114.4 71 76.1
Lsat_1_v5_gn_5_131141 Lactuca sativa HOM05D006472 ORTHO05D008222 2.6e-18 97.1 69 65.2
MCO15G146 Micromonas commoda HOM05D006472 ORTHO05D008222 1.9e-16 90.9 189 30.7
Cre12.g532650 Chlamydomonas reinhardtii HOM05D006472 ORTHO05D008222 4.1e-08 63.2 141 34.0
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 4.6e-07 59.7 50 46.0
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 1.0e-06 58.5 47 55.3


User provided reference genes

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