Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g15520 Coffea canephora HOM05D006472 ORTHO05D008222 1.1e-145 520.0 270 100.0
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 1.8e-108 396.4 268 75.4
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 2.0e-107 392.9 265 75.8
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 7.6e-107 391.0 268 74.3
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 2.1e-104 382.9 268 72.0
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 2.7e-104 382.5 268 71.3
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 7.9e-104 380.9 269 74.3
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 6.7e-103 377.9 268 70.1
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 8.7e-103 377.5 268 72.0
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 1.1e-102 377.1 269 72.1
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 3.3e-102 375.6 268 71.6
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 4.3e-102 375.2 268 70.9
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 9.6e-102 374.0 268 70.5
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 9.6e-102 374.0 268 70.1
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 2.1e-101 372.9 268 71.3
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 3.7e-101 372.1 268 71.3
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 1.4e-100 370.2 268 69.8
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 1.4e-100 370.2 269 70.3
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 2.4e-100 369.4 269 70.3
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 3.1e-100 369.0 268 71.3
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 4.0e-100 368.6 268 70.1
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 5.3e-100 368.2 268 69.0
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 6.9e-100 367.9 270 69.3
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 9.0e-100 367.5 268 69.4
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 9.0e-100 367.5 268 70.1
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 2.0e-99 366.3 268 71.6
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 2.6e-99 365.9 268 70.5
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 2.6e-99 365.9 263 69.2
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 7.6e-99 364.4 263 70.3
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 1.0e-98 364.0 268 70.5
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 1.0e-98 364.0 269 68.4
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 2.9e-98 362.5 268 69.8
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 2.9e-98 362.5 268 69.4
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 2.9e-98 362.5 270 68.1
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 3.8e-98 362.1 270 67.8
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 8.4e-98 360.9 260 70.8
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 1.4e-97 360.1 270 67.8
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 1.9e-97 359.8 263 70.3
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 2.5e-97 359.4 260 70.4
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 3.2e-97 359.0 268 68.3
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 7.1e-97 357.8 242 75.2
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 2.7e-96 355.9 268 70.1
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 2.7e-96 355.9 267 67.0
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 3.5e-96 355.5 292 65.1
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 4.6e-96 355.1 268 70.1
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 6.0e-96 354.8 270 67.0
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 1.0e-95 354.0 268 65.3
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 1.0e-95 354.0 263 67.7
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 1.3e-95 353.6 268 66.4
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 1.8e-95 353.2 266 68.4
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 1.8e-95 353.2 268 68.7
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 3.0e-95 352.4 268 66.8
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 8.7e-95 350.9 266 67.7
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 8.7e-95 350.9 266 67.7
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 1.1e-94 350.5 266 67.7
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 3.3e-94 349.0 266 66.9
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 5.7e-94 348.2 268 68.7
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 7.4e-94 347.8 294 64.3
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 9.6e-94 347.4 268 66.0
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 9.6e-94 347.4 261 66.7
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 9.6e-94 347.4 245 72.7
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 9.6e-94 347.4 263 67.3
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 2.8e-93 345.9 271 66.4
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 3.7e-93 345.5 266 67.3
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 4.5e-91 338.6 257 67.3
ClCG10G000010 Citrullus lanatus HOM05D006472 ORTHO05D008222 5.8e-91 338.2 300 62.0
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 1.0e-90 337.4 268 65.3
Cpa.g.sc2.261 Carica papaya HOM05D006472 ORTHO05D008222 1.2e-88 330.5 286 62.6
CARHR264090 Cardamine hirsuta HOM05D006472 ORTHO05D008222 2.3e-87 326.2 264 63.6
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 8.7e-87 324.3 261 65.5
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 1.9e-86 323.2 264 63.3
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 1.9e-86 323.2 264 63.3
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 1.9e-86 323.2 261 65.1
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 2.5e-86 322.8 260 63.1
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 1.8e-84 316.6 264 62.1
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 2.4e-84 316.2 265 62.3
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 6.9e-84 314.7 264 62.1
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 6.9e-84 314.7 265 62.3
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 2.0e-83 313.2 264 61.7
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 1.3e-82 310.5 268 61.6
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 1.7e-82 310.1 263 60.5
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 2.2e-82 309.7 264 61.7
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 2.2e-82 309.7 264 61.7
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 2.2e-82 309.7 264 61.7
Os04g0347600 Oryza sativa ssp. japonica HOM05D006472 ORTHO05D008222 5.0e-82 308.5 251 61.4
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 5.5e-81 305.1 257 61.9
Nn5g26768 Nelumbo nucifera HOM05D006472 ORTHO05D008222 7.2e-81 304.7 208 73.1
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 2.7e-80 302.8 244 63.9
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 2.0e-78 296.6 259 61.0
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 3.0e-71 272.7 265 55.5
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 3.9e-71 272.3 266 57.5
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 3.7e-69 265.8 266 56.8
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 5.0e-66 255.4 168 77.4
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 3.6e-64 249.2 208 60.1
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 1.8e-60 236.9 208 60.6
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 4.1e-60 235.7 208 56.7
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 5.3e-60 235.3 208 58.2
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 9.4e-57 224.6 208 54.3
Gorai.003G153200 Gossypium raimondii HOM05D006472 ORTHO05D008222 1.8e-52 210.3 158 68.4
Ciclev10004061m.g Citrus clementina HOM05D006472 ORTHO05D008222 2.0e-51 206.8 153 71.2
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 6.3e-45 185.3 209 46.9
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 2.7e-43 179.9 209 42.1
Peaxi162Scf00293g00815 Petunia axillaris HOM05D006472 ORTHO05D008222 4.0e-31 139.4 104 67.3
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 2.1e-19 100.5 165 41.8
Actinidia23826 Actinidia chinensis HOM05D006472 ORTHO05D008222 7.8e-11 72.0 64 62.5


User provided reference genes

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